Analysis of interatomic Contacts of Structural Units in PDB entry:
2YAX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2YAX entry

There are 10 chains in PDB entry 2YAX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 2VAL 30
A
 MET 32GLU 308
B
 PRO 2VAL 30
B
 MET 32LEU 100
B
 TYR 102GLU 308
C
 PRO 2VAL 30
C
 MET 32LEU 100
C
 TYR 102GLU 308
D
 PRO 2VAL 30
D
 MET 32GLU 304
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 84 helices in PDB entry 2YAX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
16 35Right-handed alpha
Helix 2
2
A
82 93Right-handed alpha
Helix 3
3
A
93 103Right-handed alpha
Helix 4
4
A
104 106Right-handed 310
Helix 5
5
A
132 143Right-handed alpha
Helix 6
6
A
145 149Right-handed 310
Helix 7
7
A
172 188Right-handed alpha
Helix 8
8
A
213 222Right-handed alpha
Helix 9
9
A
230 234Right-handed 310
Helix 10
10
A
238 242Right-handed 310
Helix 11
11
A
256 265Right-handed alpha
Helix 12
12
A
265 270Right-handed alpha
Helix 13
13
A
270 282Right-handed alpha
Helix 14
14
A
301 308Right-handed alpha
Helix 15
15
B
16 35Right-handed alpha
Helix 16
16
B
82 93Right-handed alpha
Helix 17
17
B
93 103Right-handed alpha
Helix 18
18
B
104 106Right-handed 310
Helix 19
19
B
132 143Right-handed alpha
Helix 20
20
B
145 149Right-handed 310
Helix 21
21
B
172 188Right-handed alpha
Helix 22
22
B
213 222Right-handed alpha
Helix 23
23
B
230 234Right-handed 310
Helix 24
24
B
238 242Right-handed 310
Helix 25
25
B
256 265Right-handed alpha
Helix 26
26
B
265 270Right-handed alpha
Helix 27
27
B
270 282Right-handed alpha
Helix 28
28
B
301 307Right-handed alpha
Helix 29
29
C
16 35Right-handed alpha
Helix 30
30
C
82 93Right-handed alpha
Helix 31
31
C
93 103Right-handed alpha
Helix 32
32
C
104 106Right-handed 310
Helix 33
33
C
132 143Right-handed alpha
Helix 34
34
C
145 149Right-handed 310
Helix 35
35
C
172 188Right-handed alpha
Helix 36
36
C
213 222Right-handed alpha
Helix 37
37
C
230 234Right-handed 310
Helix 38
38
C
238 242Right-handed 310
Helix 39
39
C
256 265Right-handed alpha
Helix 40
40
C
265 270Right-handed alpha
Helix 41
41
C
270 282Right-handed alpha
Helix 42
42
C
301 308Right-handed alpha
Helix 43
43
D
16 35Right-handed alpha
Helix 44
44
D
82 93Right-handed alpha
Helix 45
45
D
93 103Right-handed alpha
Helix 46
46
D
104 106Right-handed 310
Helix 47
47
D
132 143Right-handed alpha
Helix 48
48
D
145 149Right-handed 310
Helix 49
49
D
172 188Right-handed alpha
Helix 50
50
D
213 222Right-handed alpha
Helix 51
51
D
230 234Right-handed 310
Helix 52
52
D
238 242Right-handed 310
Helix 53
53
D
256 265Right-handed alpha
Helix 54
54
D
265 270Right-handed alpha
Helix 55
55
D
270 282Right-handed alpha
Helix 56
56
D
301 307Right-handed alpha
Helix 57
57
E
16 35Right-handed alpha
Helix 58
58
E
82 93Right-handed alpha
Helix 59
59
E
93 103Right-handed alpha
Helix 60
60
E
104 106Right-handed 310
Helix 61
61
E
132 143Right-handed alpha
Helix 62
62
E
145 149Right-handed 310
Helix 63
63
E
172 188Right-handed alpha
Helix 64
64
E
213 222Right-handed alpha
Helix 65
65
E
230 234Right-handed 310
Helix 66
66
E
238 242Right-handed 310
Helix 67
67
E
256 265Right-handed alpha
Helix 68
68
E
265 270Right-handed alpha
Helix 69
69
E
270 282Right-handed alpha
Helix 70
70
E
301 308Right-handed alpha
Helix 71
71
F
16 35Right-handed alpha
Helix 72
72
F
82 93Right-handed alpha
Helix 73
73
F
93 103Right-handed alpha
Helix 74
74
F
104 106Right-handed 310
Helix 75
75
F
132 143Right-handed alpha
Helix 76
76
F
145 149Right-handed 310
Helix 77
77
F
172 188Right-handed alpha
Helix 78
78
F
213 222Right-handed alpha
Helix 79
79
F
230 234Right-handed 310
Helix 80
80
F
238 242Right-handed 310
Helix 81
81
F
256 265Right-handed alpha
Helix 82
82
F
265 270Right-handed alpha
Helix 83
83
F
270 282Right-handed alpha
Helix 84
84
F
301 307Right-handed alpha
Back to top of page

There are 54 sheets in PDB entry 2YAX. Click on sheet of interest to get list of strands forming it: 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54,

There are 1 strands in 1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
5 14first strand
Back to list of sheets
Back to top of page

There are 1 strands in 2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
40 51first strand
Back to list of sheets
Back to top of page

There are 1 strands in 3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
71 80first strand
Back to list of sheets
Back to top of page

There are 1 strands in 4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
108 113first strand
Back to list of sheets
Back to top of page

There are 1 strands in 5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
115 123first strand
Back to list of sheets
Back to top of page

There are 1 strands in 6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
160 168first strand
Back to list of sheets
Back to top of page

There are 1 strands in 7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
193 204first strand
Back to list of sheets
Back to top of page

There are 1 strands in 8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
246 254first strand
Back to list of sheets
Back to top of page

There are 1 strands in 9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
284 299first strand
Back to list of sheets
Back to top of page

There are 1 strands in 10 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
5 14first strand
Back to list of sheets
Back to top of page

There are 1 strands in 11 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
40 51first strand
Back to list of sheets
Back to top of page

There are 1 strands in 12 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
71 80first strand
Back to list of sheets
Back to top of page

There are 1 strands in 13 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
108 113first strand
Back to list of sheets
Back to top of page

There are 1 strands in 14 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
115 123first strand
Back to list of sheets
Back to top of page

There are 1 strands in 15 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
160 168first strand
Back to list of sheets
Back to top of page

There are 1 strands in 16 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
193 204first strand
Back to list of sheets
Back to top of page

There are 1 strands in 17 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
246 254first strand
Back to list of sheets
Back to top of page

There are 1 strands in 18 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
284 299first strand
Back to list of sheets
Back to top of page

There are 1 strands in 19 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
5 14first strand
Back to list of sheets
Back to top of page

There are 1 strands in 20 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
40 51first strand
Back to list of sheets
Back to top of page

There are 1 strands in 21 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
71 80first strand
Back to list of sheets
Back to top of page

There are 1 strands in 22 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
108 113first strand
Back to list of sheets
Back to top of page

There are 1 strands in 23 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
115 123first strand
Back to list of sheets
Back to top of page

There are 1 strands in 24 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
160 168first strand
Back to list of sheets
Back to top of page

There are 1 strands in 25 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
193 204first strand
Back to list of sheets
Back to top of page

There are 1 strands in 26 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
246 254first strand
Back to list of sheets
Back to top of page

There are 1 strands in 27 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
284 299first strand
Back to list of sheets
Back to top of page

There are 1 strands in 28 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
5 14first strand
Back to list of sheets
Back to top of page

There are 1 strands in 29 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
40 51first strand
Back to list of sheets
Back to top of page

There are 1 strands in 30 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
71 80first strand
Back to list of sheets
Back to top of page

There are 1 strands in 31 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
108 113first strand
Back to list of sheets
Back to top of page

There are 1 strands in 32 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
115 123first strand
Back to list of sheets
Back to top of page

There are 1 strands in 33 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
160 168first strand
Back to list of sheets
Back to top of page

There are 1 strands in 34 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
193 204first strand
Back to list of sheets
Back to top of page

There are 1 strands in 35 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
246 254first strand
Back to list of sheets
Back to top of page

There are 1 strands in 36 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
284 299first strand
Back to list of sheets
Back to top of page

There are 1 strands in 37 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
5 14first strand
Back to list of sheets
Back to top of page

There are 1 strands in 38 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
40 51first strand
Back to list of sheets
Back to top of page

There are 1 strands in 39 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
71 80first strand
Back to list of sheets
Back to top of page

There are 1 strands in 40 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
108 113first strand
Back to list of sheets
Back to top of page

There are 1 strands in 41 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
115 123first strand
Back to list of sheets
Back to top of page

There are 1 strands in 42 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
160 168first strand
Back to list of sheets
Back to top of page

There are 1 strands in 43 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
193 204first strand
Back to list of sheets
Back to top of page

There are 1 strands in 44 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
246 254first strand
Back to list of sheets
Back to top of page

There are 1 strands in 45 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
284 299first strand
Back to list of sheets
Back to top of page

There are 1 strands in 46 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
5 14first strand
Back to list of sheets
Back to top of page

There are 1 strands in 47 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
40 51first strand
Back to list of sheets
Back to top of page

There are 1 strands in 48 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
71 80first strand
Back to list of sheets
Back to top of page

There are 1 strands in 49 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
108 113first strand
Back to list of sheets
Back to top of page

There are 1 strands in 50 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
115 123first strand
Back to list of sheets
Back to top of page

There are 1 strands in 51 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
160 168first strand
Back to list of sheets
Back to top of page

There are 1 strands in 52 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
193 204first strand
Back to list of sheets
Back to top of page

There are 1 strands in 53 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
246 254first strand
Back to list of sheets
Back to top of page

There are 1 strands in 54 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
284 299first strand
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il