Analysis of interatomic Contacts of Structural Units in PDB entry:
2YCY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2YCY entry

There are 2 chains in PDB entry 2YCY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 TRP 40PHE 359
B
 GLN 39PHE 359
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 27 helices in PDB entry 2YCY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
42 48Right-handed alpha
Helix 2
2
A
50 69Right-handed alpha
Helix 3
3
A
75 93Right-handed alpha
Helix 4
4
A
93 105Right-handed alpha
Helix 5
5
A
110 145Right-handed alpha
Helix 6
6
A
145 153Right-handed alpha
Helix 7
7
A
154 173Right-handed alpha
Helix 8
8
A
173 179Right-handed alpha
Helix 9
9
A
186 195Right-handed alpha
Helix 10
10
A
204 216Right-handed alpha
Helix 11
11
A
216 238Right-handed alpha
Helix 12
12
A
273 316Right-handed alpha
Helix 13
13
A
321 343Right-handed alpha
Helix 14
14
A
346 357Right-handed alpha
Helix 15
15
B
40 69Right-handed alpha
Helix 16
16
B
75 93Right-handed alpha
Helix 17
17
B
93 105Right-handed alpha
Helix 18
18
B
110 145Right-handed alpha
Helix 19
19
B
145 153Right-handed alpha
Helix 20
20
B
154 173Right-handed alpha
Helix 21
21
B
173 179Right-handed alpha
Helix 22
22
B
186 195Right-handed alpha
Helix 23
23
B
204 216Right-handed alpha
Helix 24
24
B
216 238Right-handed alpha
Helix 25
25
B
273 316Right-handed alpha
Helix 26
26
B
321 343Right-handed alpha
Helix 27
27
B
346 357Right-handed alpha
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There are no sheets in PDB entry 2YCY
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il