Analysis of interatomic Contacts of Structural Units in PDB entry:
2YCZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2YCZ entry

There are 2 chains in PDB entry 2YCZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 39PHE 359
B
 GLN 39PHE 359
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 30 helices in PDB entry 2YCZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
41 69Right-handed alpha
Helix 2
2
A
70 73Right-handed 310
Helix 3
3
A
75 93Right-handed alpha
Helix 4
4
A
93 104Right-handed alpha
Helix 5
5
A
109 145Right-handed alpha
Helix 6
6
A
145 153Right-handed alpha
Helix 7
7
A
154 179Right-handed alpha
Helix 8
8
A
186 194Right-handed alpha
Helix 9
9
A
204 216Right-handed alpha
Helix 10
10
A
216 237Right-handed alpha
Helix 11
11
A
280 285Right-handed alpha
Helix 12
12
A
287 316Right-handed alpha
Helix 13
13
A
321 335Right-handed alpha
Helix 14
14
A
337 343Right-handed alpha
Helix 15
15
A
346 357Right-handed alpha
Helix 16
16
B
44 69Right-handed alpha
Helix 17
17
B
70 73Right-handed 310
Helix 18
18
B
75 93Right-handed alpha
Helix 19
19
B
93 104Right-handed alpha
Helix 20
20
B
109 145Right-handed alpha
Helix 21
21
B
145 153Right-handed alpha
Helix 22
22
B
154 179Right-handed alpha
Helix 23
23
B
186 194Right-handed alpha
Helix 24
24
B
204 216Right-handed alpha
Helix 25
25
B
216 238Right-handed alpha
Helix 26
26
B
275 284Right-handed alpha
Helix 27
27
B
287 316Right-handed alpha
Helix 28
28
B
321 335Right-handed alpha
Helix 29
29
B
337 343Right-handed alpha
Helix 30
30
B
346 357Right-handed alpha
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There are no sheets in PDB entry 2YCZ
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il