Analysis of interatomic Contacts of Structural Units in PDB entry:
2YEM


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2YEM entry

There are 2 chains in PDB entry 2YEM (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 349PRO 458
B
 LYS 349ASP 459
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 2YEM. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
349 365Right-handed alpha
Helix 2
2
A
366 368Right-handed 310
Helix 3
3
A
369 374Right-handed alpha
Helix 4
4
A
375 377Right-handed 310
Helix 5
5
A
381 386Right-handed alpha
Helix 6
6
A
389 394Right-handed alpha
Helix 7
7
A
399 409Right-handed alpha
Helix 8
8
A
414 433Right-handed alpha
Helix 9
9
A
437 456Right-handed alpha
Helix 10
10
B
349 365Right-handed alpha
Helix 11
11
B
366 368Right-handed 310
Helix 12
12
B
369 374Right-handed alpha
Helix 13
13
B
375 377Right-handed 310
Helix 14
14
B
381 386Right-handed alpha
Helix 15
15
B
389 394Right-handed alpha
Helix 16
16
B
399 409Right-handed alpha
Helix 17
17
B
414 433Right-handed alpha
Helix 18
18
B
437 456Right-handed alpha
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There are no sheets in PDB entry 2YEM
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