Analysis of interatomic Contacts of Structural Units in PDB entry:
2YFE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2YFE entry

There are 2 chains in PDB entry 2YFE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 202LEU 476
B
 PRO 206LYS 474
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 2YFE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
206 225Right-handed alpha
Helix 2
2
A
230 238Right-handed alpha
Helix 3
3
A
252 261Right-handed alpha
Helix 4
4
A
277 301Right-handed alpha
Helix 5
5
A
311 332Right-handed alpha
Helix 6
6
A
350 354Right-handed alpha
Helix 7
7
A
365 375Right-handed alpha
Helix 8
8
A
381 392Right-handed alpha
Helix 9
9
A
403 424Right-handed alpha
Helix 10
10
A
431 459Right-handed alpha
Helix 11
11
A
467 473Right-handed alpha
Helix 12
12
B
209 225Right-handed alpha
Helix 13
13
B
230 237Right-handed alpha
Helix 14
14
B
252 261Right-handed alpha
Helix 15
15
B
277 301Right-handed alpha
Helix 16
16
B
311 332Right-handed alpha
Helix 17
17
B
350 354Right-handed alpha
Helix 18
18
B
365 375Right-handed alpha
Helix 19
19
B
381 392Right-handed alpha
Helix 20
20
B
403 424Right-handed alpha
Helix 21
21
B
431 459Right-handed alpha
Helix 22
22
B
467 472Right-handed alpha
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There are 7 sheets in PDB entry 2YFE. Click on sheet of interest to get list of strands forming it: 1, 2, 3, 4, 5, 6, 7,

There are 1 strands in 1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
247 249first strand
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There are 1 strands in 2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
334 335first strand
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There are 1 strands in 3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
338 341first strand
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There are 1 strands in 4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
346 349first strand
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There are 1 strands in 5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
247 249first strand
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There are 1 strands in 6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
338 341first strand
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There are 1 strands in 7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
346 349first strand
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il