Analysis of interatomic Contacts of Structural Units in PDB entry:
2YHG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2YHG entry

There is 1 chain in PDB entry 2YHG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 523GLN 933
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 2YHG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
537 549Right-handed alpha
Helix 2
2
A
550 553Right-handed 310
Helix 3
3
A
572 590Right-handed alpha
Helix 4
4
A
598 605Right-handed alpha
Helix 5
5
A
613 618Right-handed 310
Helix 6
6
A
624 636Right-handed alpha
Helix 7
7
A
650 664Right-handed alpha
Helix 8
8
A
665 675Right-handed alpha
Helix 9
9
A
685 695Right-handed alpha
Helix 10
10
A
712 720Right-handed alpha
Helix 11
11
A
723 729Right-handed alpha
Helix 12
12
A
741 746Right-handed alpha
Helix 13
13
A
777 781Right-handed 310
Helix 14
14
A
783 788Right-handed 310
Helix 15
15
A
800 802Right-handed 310
Helix 16
16
A
803 820Right-handed alpha
Helix 17
17
A
822 826Right-handed 310
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There are 4 sheets in PDB entry 2YHG. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD,

There are 6 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
606 608first strand
Strand 2
A
554 560parallel
Strand 3
A
526 531parallel
Strand 4
A
642 646parallel
Strand 5
A
676 681parallel
Strand 6
A
699 703parallel
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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
769 772first strand
Strand 2
A
791 794anti-parallel
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There are 4 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
843 848first strand
Strand 2
A
923 933parallel
Strand 3
A
907 916anti-parallel
Strand 4
A
868 874anti-parallel
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There are 3 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
852 856first strand
Strand 2
A
894 898anti-parallel
Strand 3
A
887 888anti-parallel
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