Analysis of interatomic Contacts of Structural Units in PDB entry:
2YHX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2YHX entry

There is 1 chain in PDB entry 2YHX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 2ALA 458
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 2YHX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
3 18Right-handed alpha
Helix 2
2
A
20 40Right-handed alpha
Helix 3
3
A
105 124Right-handed alpha
Helix 4
4
A
166 179Right-handed alpha
Helix 5
5
A
188 201Right-handed alpha
Helix 6
6
A
221 225Right-handed 310
Helix 7
7
A
259 269Right-handed alpha
Helix 8
8
A
274 281Right-handed alpha
Helix 9
9
A
284 299Right-handed alpha
Helix 10
10
A
318 327Right-handed alpha
Helix 11
11
A
332 344Right-handed alpha
Helix 12
12
A
348 371Right-handed alpha
Helix 13
13
A
371 382Right-handed alpha
Helix 14
14
A
399 413Right-handed alpha
Helix 15
15
A
418 422Right-handed 310
Helix 16
16
A
434 450Right-handed alpha
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There are 2 sheets in PDB entry 2YHX. Click on sheet of interest to get list of strands forming it: A, B,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
48 49first strand
Strand 2
A
240 243anti-parallel
Strand 3
A
214 220anti-parallel
Strand 4
A
204 210anti-parallel
Strand 5
A
386 391parallel
Strand 6
A
424 428parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
85 94first strand
Strand 2
A
73 82anti-parallel
Strand 3
A
62 69anti-parallel
Strand 4
A
131 136parallel
Strand 5
A
181 187parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il