Analysis of interatomic Contacts of Structural Units in PDB entry:
2YN0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2YN0 entry

There is 1 chain in PDB entry 2YN0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 3VAL 260
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 9 helices in PDB entry 2YN0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
15 18Right-handed 310
Helix 2
2
A
37 53Right-handed alpha
Helix 3
3
A
66 81Right-handed alpha
Helix 4
4
A
88 91Right-handed 310
Helix 5
5
A
107 115Right-handed alpha
Helix 6
6
A
135 158Right-handed alpha
Helix 7
7
A
169 182Right-handed alpha
Helix 8
8
A
230 234Right-handed 310
Helix 9
9
A
256 260Right-handed 310
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There is 1 sheet ( AA) in PDB entry 2YN0.

There are 6 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
84 86first strand
Strand 2
A
61 63parallel
Strand 3
A
163 168parallel
Strand 4
A
5 10parallel
Strand 5
A
204 209anti-parallel
Strand 6
A
236 243anti-parallel
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