Analysis of interatomic Contacts of Structural Units in PDB entry:
2YNQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2YNQ entry

There are 4 chains in PDB entry 2YNQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 242GLU 390
B
 SER -1GLU 389
C
 ALA 241GLU 389
D
 THR 0GLU 390
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 36 helices in PDB entry 2YNQ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
242 257Right-handed alpha
Helix 2
2
A
260 268Right-handed alpha
Helix 3
3
A
272 274Right-handed 310
Helix 4
4
A
276 290Right-handed alpha
Helix 5
5
A
295 305Right-handed alpha
Helix 6
6
A
311 322Right-handed alpha
Helix 7
7
A
325 335Right-handed alpha
Helix 8
8
A
338 355Right-handed alpha
Helix 9
9
A
360 386Right-handed alpha
Helix 10
1
B
242 257Right-handed alpha
Helix 11
2
B
260 268Right-handed alpha
Helix 12
3
B
272 274Right-handed 310
Helix 13
4
B
276 290Right-handed alpha
Helix 14
5
B
295 305Right-handed alpha
Helix 15
6
B
311 322Right-handed alpha
Helix 16
7
B
325 335Right-handed alpha
Helix 17
8
B
338 355Right-handed alpha
Helix 18
9
B
360 386Right-handed alpha
Helix 19
1
C
242 257Right-handed alpha
Helix 20
2
C
260 268Right-handed alpha
Helix 21
3
C
272 274Right-handed 310
Helix 22
4
C
276 290Right-handed alpha
Helix 23
5
C
295 305Right-handed alpha
Helix 24
6
C
311 322Right-handed alpha
Helix 25
7
C
325 335Right-handed alpha
Helix 26
8
C
338 355Right-handed alpha
Helix 27
9
C
360 386Right-handed alpha
Helix 28
1
D
242 257Right-handed alpha
Helix 29
2
D
260 268Right-handed alpha
Helix 30
3
D
272 274Right-handed 310
Helix 31
4
D
276 290Right-handed alpha
Helix 32
5
D
295 305Right-handed alpha
Helix 33
6
D
311 322Right-handed alpha
Helix 34
7
D
325 335Right-handed alpha
Helix 35
8
D
338 355Right-handed alpha
Helix 36
9
D
360 386Right-handed alpha
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There are no sheets in PDB entry 2YNQ
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