Analysis of interatomic Contacts of Structural Units in PDB entry:
2YNS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2YNS entry

There are 4 chains in PDB entry 2YNS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 73MET 494
B
 SER 73MET 494
C
 SER 1HIS 9
D
 SER 1HIS 9
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 67 helices in PDB entry 2YNS. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
73 82Right-handed alpha
Helix 2
2
A
85 101Right-handed alpha
Helix 3
3
A
107 114Right-handed alpha
Helix 4
4
A
116 124Right-handed alpha
Helix 5
5
A
129 144Right-handed alpha
Helix 6
6
A
147 157Right-handed alpha
Helix 7
7
A
158 166Right-handed alpha
Helix 8
8
A
167 169Right-handed 310
Helix 9
9
A
171 187Right-handed alpha
Helix 10
10
A
189 199Right-handed alpha
Helix 11
11
A
201 208Right-handed alpha
Helix 12
12
A
214 230Right-handed alpha
Helix 13
13
A
236 241Right-handed alpha
Helix 14
14
A
242 251Right-handed alpha
Helix 15
15
A
255 270Right-handed alpha
Helix 16
16
A
273 283Right-handed alpha
Helix 17
17
A
285 292Right-handed alpha
Helix 18
18
A
293 295Right-handed 310
Helix 19
19
A
297 312Right-handed alpha
Helix 20
20
A
315 324Right-handed alpha
Helix 21
21
A
326 337Right-handed alpha
Helix 22
22
A
340 355Right-handed alpha
Helix 23
23
A
358 368Right-handed alpha
Helix 24
24
A
370 381Right-handed alpha
Helix 25
25
A
382 400Right-handed alpha
Helix 26
26
A
401 411Right-handed alpha
Helix 27
27
A
413 420Right-handed alpha
Helix 28
28
A
421 423Right-handed 310
Helix 29
29
A
425 450Right-handed alpha
Helix 30
30
A
455 464Right-handed alpha
Helix 31
31
A
465 473Right-handed alpha
Helix 32
32
A
474 476Right-handed 310
Helix 33
33
A
478 493Right-handed alpha
Helix 34
34
B
74 82Right-handed alpha
Helix 35
35
B
85 101Right-handed alpha
Helix 36
36
B
107 114Right-handed alpha
Helix 37
37
B
116 123Right-handed alpha
Helix 38
38
B
124 126Right-handed 310
Helix 39
39
B
129 145Right-handed alpha
Helix 40
40
B
147 157Right-handed alpha
Helix 41
41
B
158 166Right-handed alpha
Helix 42
42
B
167 169Right-handed 310
Helix 43
43
B
171 187Right-handed alpha
Helix 44
44
B
189 199Right-handed alpha
Helix 45
45
B
201 208Right-handed alpha
Helix 46
46
B
214 230Right-handed alpha
Helix 47
47
B
236 241Right-handed alpha
Helix 48
48
B
242 251Right-handed alpha
Helix 49
49
B
255 270Right-handed alpha
Helix 50
50
B
273 283Right-handed alpha
Helix 51
51
B
285 292Right-handed alpha
Helix 52
52
B
293 295Right-handed 310
Helix 53
53
B
297 312Right-handed alpha
Helix 54
54
B
315 324Right-handed alpha
Helix 55
55
B
326 337Right-handed alpha
Helix 56
56
B
340 355Right-handed alpha
Helix 57
57
B
358 368Right-handed alpha
Helix 58
58
B
370 381Right-handed alpha
Helix 59
59
B
382 400Right-handed alpha
Helix 60
60
B
401 411Right-handed alpha
Helix 61
61
B
413 420Right-handed alpha
Helix 62
62
B
421 423Right-handed 310
Helix 63
63
B
425 450Right-handed alpha
Helix 64
64
B
455 464Right-handed alpha
Helix 65
65
B
465 473Right-handed alpha
Helix 66
66
B
474 476Right-handed 310
Helix 67
67
B
478 493Right-handed alpha
Back to top of page
There are no sheets in PDB entry 2YNS
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il