Analysis of interatomic Contacts of Structural Units in PDB entry:
2YPF


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2YPF entry

There are 3 chains in PDB entry 2YPF (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 185LEU 861
B
 T -2 A 19
C
 T -19 A 1
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 46 helices in PDB entry 2YPF. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
229 235Right-handed alpha
Helix 2
2
A
240 243Right-handed 310
Helix 3
3
A
244 250Right-handed alpha
Helix 4
4
A
258 263Right-handed alpha
Helix 5
5
A
267 278Right-handed alpha
Helix 6
6
A
292 299Right-handed alpha
Helix 7
7
A
302 314Right-handed alpha
Helix 8
8
A
314 319Right-handed alpha
Helix 9
9
A
324 333Right-handed alpha
Helix 10
10
A
336 354Right-handed alpha
Helix 11
11
A
358 367Right-handed alpha
Helix 12
12
A
370 387Right-handed alpha
Helix 13
13
A
392 401Right-handed alpha
Helix 14
14
A
404 421Right-handed alpha
Helix 15
15
A
426 435Right-handed alpha
Helix 16
16
A
438 458Right-handed alpha
Helix 17
17
A
460 465Right-handed alpha
Helix 18
18
A
472 484Right-handed alpha
Helix 19
19
A
484 489Right-handed alpha
Helix 20
20
A
494 503Right-handed alpha
Helix 21
21
A
506 524Right-handed alpha
Helix 22
22
A
528 537Right-handed alpha
Helix 23
23
A
540 558Right-handed alpha
Helix 24
24
A
562 570Right-handed alpha
Helix 25
25
A
574 591Right-handed alpha
Helix 26
26
A
596 605Right-handed alpha
Helix 27
27
A
608 618Right-handed alpha
Helix 28
28
A
619 626Right-handed alpha
Helix 29
29
A
630 639Right-handed alpha
Helix 30
30
A
642 648Right-handed alpha
Helix 31
31
A
654 659Right-handed alpha
Helix 32
32
A
664 673Right-handed alpha
Helix 33
33
A
676 686Right-handed alpha
Helix 34
34
A
687 696Right-handed alpha
Helix 35
35
A
698 702Right-handed 310
Helix 36
36
A
710 720Right-handed alpha
Helix 37
37
A
722 727Right-handed alpha
Helix 38
38
A
732 741Right-handed alpha
Helix 39
39
A
744 755Right-handed alpha
Helix 40
40
A
757 762Right-handed alpha
Helix 41
41
A
766 775Right-handed alpha
Helix 42
42
A
778 790Right-handed alpha
Helix 43
43
A
802 809Right-handed alpha
Helix 44
44
A
812 820Right-handed alpha
Helix 45
45
A
834 843Right-handed alpha
Helix 46
46
A
848 856Right-handed alpha
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There are no sheets in PDB entry 2YPF
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