Analysis of interatomic Contacts of Structural Units in PDB entry:
2YPY

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 2YPY entry

There are 10 chains in PDB entry 2YPY (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	TYR 1014	GLN 1147
B	TYR 1014	GLY 1149
C	TYR 1014	PRO 1148
D	TYR 1014	PRO 1148
E	TYR 1014	GLY 1149
F	TYR 1014	GLN 1147
G	TYR 1014	THR 1146
H	TYR 1014	GLN 1147
I	TYR 1014	GLN 1147
J	TYR 1014	TYR 1038

There are 40 helices in PDB entry 2YPY. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	1024	1026	Right-handed alpha
Helix 2	2	A	1032	1046	Right-handed alpha
Helix 3	3	A	1065	1074	Right-handed alpha
Helix 4	4	A	1109	1125	Right-handed alpha
Helix 5	5	B	1024	1026	Right-handed alpha
Helix 6	6	B	1032	1046	Right-handed alpha
Helix 7	7	B	1065	1074	Right-handed alpha
Helix 8	8	B	1109	1125	Right-handed alpha
Helix 9	9	C	1024	1026	Right-handed alpha
Helix 10	10	C	1032	1046	Right-handed alpha
Helix 11	11	C	1065	1074	Right-handed alpha
Helix 12	12	C	1109	1125	Right-handed alpha
Helix 13	13	D	1024	1026	Right-handed alpha
Helix 14	14	D	1032	1046	Right-handed alpha
Helix 15	15	D	1065	1074	Right-handed alpha
Helix 16	16	D	1109	1125	Right-handed alpha
Helix 17	17	E	1024	1026	Right-handed alpha
Helix 18	18	E	1032	1046	Right-handed alpha
Helix 19	19	E	1065	1074	Right-handed alpha
Helix 20	20	E	1109	1125	Right-handed alpha
Helix 21	21	F	1024	1026	Right-handed alpha
Helix 22	22	F	1032	1046	Right-handed alpha
Helix 23	23	F	1065	1074	Right-handed alpha
Helix 24	24	F	1109	1125	Right-handed alpha
Helix 25	25	G	1024	1026	Right-handed alpha
Helix 26	26	G	1032	1042	Right-handed alpha
Helix 27	27	G	1065	1074	Right-handed alpha
Helix 28	28	G	1109	1125	Right-handed alpha
Helix 29	29	H	1024	1026	Right-handed alpha
Helix 30	30	H	1032	1046	Right-handed alpha
Helix 31	31	H	1065	1074	Right-handed alpha
Helix 32	32	H	1109	1125	Right-handed alpha
Helix 33	33	I	1024	1026	Right-handed alpha
Helix 34	34	I	1032	1046	Right-handed alpha
Helix 35	35	I	1065	1074	Right-handed alpha
Helix 36	36	I	1109	1125	Right-handed alpha
Helix 37	37	J	1024	1026	Right-handed alpha
Helix 38	38	J	1032	1046	Right-handed alpha
Helix 39	39	J	1065	1074	Right-handed alpha
Helix 40	40	J	1109	1125	Right-handed alpha

There are 50 sheets in PDB entry 2YPY. Click on sheet of interest to get list of strands forming it: 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50,

There are 1 strands in 1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1056	1062	first strand

Back to list of sheets
Back to top of page

There are 1 strands in 2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1081	1082	first strand

Back to list of sheets
Back to top of page

There are 1 strands in 3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1086	1087	first strand

Back to list of sheets
Back to top of page

There are 1 strands in 4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1100	1106	first strand

Back to list of sheets
Back to top of page

There are 1 strands in 5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1133	1139	first strand

Back to list of sheets
Back to top of page

There are 1 strands in 6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1056	1062	first strand

Back to list of sheets
Back to top of page

There are 1 strands in 7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1081	1082	first strand

Back to list of sheets
Back to top of page

There are 1 strands in 8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1086	1088	first strand

Back to list of sheets
Back to top of page

There are 1 strands in 9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1099	1106	first strand

Back to list of sheets
Back to top of page

There are 1 strands in 10 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1133	1139	first strand

Back to list of sheets
Back to top of page

There are 1 strands in 11 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1056	1062	first strand

Back to list of sheets
Back to top of page

There are 1 strands in 12 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1080	1082	first strand

Back to list of sheets
Back to top of page

There are 1 strands in 13 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1086	1087	first strand

Back to list of sheets
Back to top of page

There are 1 strands in 14 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1100	1106	first strand

Back to list of sheets
Back to top of page

There are 1 strands in 15 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1133	1139	first strand

Back to list of sheets
Back to top of page

There are 1 strands in 16 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1056	1062	first strand

Back to list of sheets
Back to top of page

There are 1 strands in 17 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1081	1082	first strand

Back to list of sheets
Back to top of page

There are 1 strands in 18 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1086	1087	first strand

Back to list of sheets
Back to top of page

There are 1 strands in 19 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1100	1106	first strand

Back to list of sheets
Back to top of page

There are 1 strands in 20 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1133	1139	first strand

Back to list of sheets
Back to top of page

There are 1 strands in 21 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	1056	1062	first strand

Back to list of sheets
Back to top of page

There are 1 strands in 22 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	1081	1082	first strand

Back to list of sheets
Back to top of page

There are 1 strands in 23 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	1086	1087	first strand

Back to list of sheets
Back to top of page

There are 1 strands in 24 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	1100	1106	first strand

Back to list of sheets
Back to top of page

There are 1 strands in 25 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	1133	1139	first strand

Back to list of sheets
Back to top of page

There are 1 strands in 26 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	1056	1062	first strand

Back to list of sheets
Back to top of page

There are 1 strands in 27 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	1080	1082	first strand

Back to list of sheets
Back to top of page

There are 1 strands in 28 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	1086	1087	first strand

Back to list of sheets
Back to top of page

There are 1 strands in 29 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	1100	1106	first strand

Back to list of sheets
Back to top of page

There are 1 strands in 30 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	1133	1139	first strand

Back to list of sheets
Back to top of page

There are 1 strands in 31 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	1056	1062	first strand

Back to list of sheets
Back to top of page

There are 1 strands in 32 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	1080	1082	first strand

Back to list of sheets
Back to top of page

There are 1 strands in 33 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	1086	1087	first strand

Back to list of sheets
Back to top of page

There are 1 strands in 34 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	1100	1106	first strand

Back to list of sheets
Back to top of page

There are 1 strands in 35 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	1133	1139	first strand

Back to list of sheets
Back to top of page

There are 1 strands in 36 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	1056	1062	first strand

Back to list of sheets
Back to top of page

There are 1 strands in 37 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	1081	1082	first strand

Back to list of sheets
Back to top of page

There are 1 strands in 38 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	1086	1087	first strand

Back to list of sheets
Back to top of page

There are 1 strands in 39 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	1100	1106	first strand

Back to list of sheets
Back to top of page

There are 1 strands in 40 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	1133	1139	first strand

Back to list of sheets
Back to top of page

There are 1 strands in 41 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	1056	1062	first strand

Back to list of sheets
Back to top of page

There are 1 strands in 42 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	1080	1082	first strand

Back to list of sheets
Back to top of page

There are 1 strands in 43 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	1086	1087	first strand

Back to list of sheets
Back to top of page

There are 1 strands in 44 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	1100	1106	first strand

Back to list of sheets
Back to top of page

There are 1 strands in 45 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	1133	1139	first strand

Back to list of sheets
Back to top of page

There are 1 strands in 46 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	1056	1062	first strand

Back to list of sheets
Back to top of page

There are 1 strands in 47 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	1080	1082	first strand

Back to list of sheets
Back to top of page

There are 1 strands in 48 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	1086	1087	first strand

Back to list of sheets
Back to top of page

There are 1 strands in 49 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	1100	1106	first strand

Back to list of sheets
Back to top of page

There are 1 strands in 50 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	1133	1139	first strand

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 2YPY

Analysis of interatomic Contacts of Structural Units in PDB entry:
2YPY