Analysis of interatomic Contacts of Structural Units in PDB entry:
2YUT


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2YUT entry

There is 1 chain in PDB entry 2YUT (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MSE 1VAL 207
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 8 helices in PDB entry 2YUT. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
10 20Right-handed alpha
Helix 2
2
A
31 43Right-handed alpha
Helix 3
3
A
53 65Right-handed alpha
Helix 4
4
A
88 108Right-handed alpha
Helix 5
5
A
122 127Right-handed alpha
Helix 6
6
A
131 154Right-handed alpha
Helix 7
7
A
169 176Right-handed 310
Helix 8
8
A
184 197Right-handed alpha
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There is 1 sheet ( A) in PDB entry 2YUT.

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
45 46first strand
Strand 2
A
24 28parallel
Strand 3
A
2 6parallel
Strand 4
A
67 72parallel
Strand 5
A
110 119parallel
Strand 6
A
158 162parallel
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