Analysis of interatomic Contacts of Structural Units in PDB entry:
2YZ7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2YZ7 entry

There are 8 chains in PDB entry 2YZ7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ARG 260
B
 MET 1ARG 260
C
 MET 1ARG 260
D
 MET 1ARG 260
E
 MET 1ARG 260
F
 MET 1ARG 260
G
 MET 1ARG 260
H
 MET 1ARG 260
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 97 helices in PDB entry 2YZ7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
14 27Right-handed alpha
Helix 2
2
A
38 54Right-handed alpha
Helix 3
3
A
66 82Right-handed alpha
Helix 4
4
A
98 102Right-handed 310
Helix 5
5
A
103 115Right-handed alpha
Helix 6
6
A
115 133Right-handed alpha
Helix 7
7
A
142 146Right-handed 310
Helix 8
8
A
152 173Right-handed alpha
Helix 9
9
A
190 205Right-handed alpha
Helix 10
10
A
207 217Right-handed alpha
Helix 11
11
A
227 240Right-handed alpha
Helix 12
12
B
14 28Right-handed alpha
Helix 13
13
B
38 54Right-handed alpha
Helix 14
14
B
66 82Right-handed alpha
Helix 15
15
B
103 115Right-handed alpha
Helix 16
16
B
115 133Right-handed alpha
Helix 17
17
B
142 146Right-handed 310
Helix 18
18
B
152 174Right-handed alpha
Helix 19
19
B
190 200Right-handed alpha
Helix 20
20
B
201 204Right-handed 310
Helix 21
21
B
207 218Right-handed alpha
Helix 22
22
B
227 239Right-handed alpha
Helix 23
23
C
14 27Right-handed alpha
Helix 24
24
C
38 54Right-handed alpha
Helix 25
25
C
66 82Right-handed alpha
Helix 26
26
C
98 102Right-handed 310
Helix 27
27
C
103 115Right-handed alpha
Helix 28
28
C
115 133Right-handed alpha
Helix 29
29
C
142 146Right-handed 310
Helix 30
30
C
152 173Right-handed alpha
Helix 31
31
C
190 204Right-handed alpha
Helix 32
32
C
207 217Right-handed alpha
Helix 33
33
C
227 240Right-handed alpha
Helix 34
34
C
241 244Right-handed 310
Helix 35
35
C
256 260Right-handed 310
Helix 36
36
D
14 27Right-handed alpha
Helix 37
37
D
38 54Right-handed alpha
Helix 38
38
D
66 82Right-handed alpha
Helix 39
39
D
98 102Right-handed 310
Helix 40
40
D
103 115Right-handed alpha
Helix 41
41
D
115 131Right-handed alpha
Helix 42
42
D
142 146Right-handed 310
Helix 43
43
D
152 174Right-handed alpha
Helix 44
44
D
190 205Right-handed alpha
Helix 45
45
D
207 217Right-handed alpha
Helix 46
46
D
227 239Right-handed alpha
Helix 47
47
D
240 244Right-handed 310
Helix 48
48
E
14 27Right-handed alpha
Helix 49
49
E
38 53Right-handed alpha
Helix 50
50
E
66 82Right-handed alpha
Helix 51
51
E
103 115Right-handed alpha
Helix 52
52
E
115 133Right-handed alpha
Helix 53
53
E
142 147Right-handed alpha
Helix 54
54
E
152 173Right-handed alpha
Helix 55
55
E
190 202Right-handed alpha
Helix 56
56
E
207 218Right-handed alpha
Helix 57
57
E
227 240Right-handed alpha
Helix 58
58
E
256 260Right-handed 310
Helix 59
59
F
15 27Right-handed alpha
Helix 60
60
F
38 54Right-handed alpha
Helix 61
61
F
66 82Right-handed alpha
Helix 62
62
F
98 102Right-handed 310
Helix 63
63
F
103 115Right-handed alpha
Helix 64
64
F
115 133Right-handed alpha
Helix 65
65
F
142 146Right-handed 310
Helix 66
66
F
152 172Right-handed alpha
Helix 67
67
F
190 205Right-handed alpha
Helix 68
68
F
207 217Right-handed alpha
Helix 69
69
F
227 239Right-handed alpha
Helix 70
70
F
240 244Right-handed 310
Helix 71
71
F
256 260Right-handed 310
Helix 72
72
G
14 27Right-handed alpha
Helix 73
73
G
38 54Right-handed alpha
Helix 74
74
G
66 82Right-handed alpha
Helix 75
75
G
98 102Right-handed 310
Helix 76
76
G
103 115Right-handed alpha
Helix 77
77
G
115 133Right-handed alpha
Helix 78
78
G
142 146Right-handed 310
Helix 79
79
G
152 172Right-handed alpha
Helix 80
80
G
191 200Right-handed alpha
Helix 81
81
G
209 218Right-handed alpha
Helix 82
82
G
227 240Right-handed alpha
Helix 83
83
G
241 244Right-handed 310
Helix 84
84
G
256 260Right-handed 310
Helix 85
85
H
14 26Right-handed alpha
Helix 86
86
H
38 52Right-handed alpha
Helix 87
87
H
66 82Right-handed alpha
Helix 88
88
H
98 102Right-handed 310
Helix 89
89
H
103 115Right-handed alpha
Helix 90
90
H
115 133Right-handed alpha
Helix 91
91
H
142 146Right-handed 310
Helix 92
92
H
152 172Right-handed alpha
Helix 93
93
H
190 202Right-handed alpha
Helix 94
94
H
207 220Right-handed alpha
Helix 95
95
H
227 240Right-handed alpha
Helix 96
96
H
241 246Right-handed 310
Helix 97
97
H
256 260Right-handed 310
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There are 9 sheets in PDB entry 2YZ7. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
7 9first strand
Strand 2
A
86 89parallel
Strand 3
A
135 140parallel
Strand 4
A
178 185parallel
Strand 5
A
250 253parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
31 33first strand
Strand 2
A
57 59parallel
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There are 7 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
57 59first strand
Strand 2
B
30 33parallel
Strand 3
B
6 9parallel
Strand 4
B
86 89parallel
Strand 5
B
135 140parallel
Strand 6
B
178 185parallel
Strand 7
B
250 253parallel
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There are 7 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
57 59first strand
Strand 2
C
30 33parallel
Strand 3
C
6 9parallel
Strand 4
C
86 89parallel
Strand 5
C
135 140parallel
Strand 6
C
178 183parallel
Strand 7
C
250 251parallel
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There are 7 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
57 59first strand
Strand 2
D
30 33parallel
Strand 3
D
6 9parallel
Strand 4
D
86 89parallel
Strand 5
D
135 139parallel
Strand 6
D
178 185parallel
Strand 7
D
250 253parallel
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There are 7 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
57 59first strand
Strand 2
E
29 33parallel
Strand 3
E
5 9parallel
Strand 4
E
86 89parallel
Strand 5
E
135 140parallel
Strand 6
E
178 185parallel
Strand 7
E
249 253parallel
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There are 7 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
57 59first strand
Strand 2
F
30 33parallel
Strand 3
F
6 9parallel
Strand 4
F
86 89parallel
Strand 5
F
135 140parallel
Strand 6
F
178 185parallel
Strand 7
F
250 253parallel
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There are 7 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
57 59first strand
Strand 2
G
29 33parallel
Strand 3
G
5 9parallel
Strand 4
G
86 89parallel
Strand 5
G
135 140parallel
Strand 6
G
178 185parallel
Strand 7
G
249 253parallel
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There are 7 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
57 58first strand
Strand 2
H
30 32parallel
Strand 3
H
6 9parallel
Strand 4
H
86 89parallel
Strand 5
H
135 140parallel
Strand 6
H
178 185parallel
Strand 7
H
250 253parallel
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