Analysis of interatomic Contacts of Structural Units in PDB entry:
2Z00


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2Z00 entry

There is 1 chain in PDB entry 2Z00 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MSE 1LYS 426
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 2Z00. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
68 79Right-handed alpha
Helix 2
2
A
96 111Right-handed alpha
Helix 3
3
A
122 126Right-handed 310
Helix 4
4
A
132 140Right-handed alpha
Helix 5
5
A
153 165Right-handed alpha
Helix 6
6
A
166 168Right-handed 310
Helix 7
7
A
177 182Right-handed alpha
Helix 8
8
A
189 196Right-handed alpha
Helix 9
9
A
201 223Right-handed alpha
Helix 10
10
A
236 249Right-handed alpha
Helix 11
11
A
258 264Right-handed alpha
Helix 12
12
A
265 272Right-handed 310
Helix 13
13
A
273 277Right-handed 310
Helix 14
14
A
284 297Right-handed alpha
Helix 15
15
A
313 317Right-handed 310
Helix 16
16
A
331 340Right-handed alpha
Helix 17
17
A
340 345Right-handed alpha
Helix 18
18
A
347 356Right-handed alpha
Helix 19
19
A
356 364Right-handed alpha
Helix 20
20
A
389 393Right-handed 310
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There are 6 sheets in PDB entry 2Z00. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
27 30first strand
Strand 2
A
14 24anti-parallel
Strand 3
A
2 11anti-parallel
Strand 4
A
38 41parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
27 30first strand
Strand 2
A
14 24anti-parallel
Strand 3
A
2 11anti-parallel
Strand 4
A
46 49parallel
Strand 5
A
378 382anti-parallel
Strand 6
A
410 416anti-parallel
Strand 7
A
419 423anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
51 56first strand
Strand 2
A
81 86parallel
Strand 3
A
114 115parallel
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There are 6 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
118 119first strand
Strand 2
A
143 145parallel
Strand 3
A
171 173parallel
Strand 4
A
229 231parallel
Strand 5
A
253 257parallel
Strand 6
A
302 303parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
186 187first strand
Strand 2
A
199 200parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
386 387first strand
Strand 2
A
406 407anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il