Analysis of interatomic Contacts of Structural Units in PDB entry:
2Z07


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2Z07 entry

There are 2 chains in PDB entry 2Z07 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 3ARG 420
B
 ALA 2ARG 420
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 36 helices in PDB entry 2Z07. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
3 16Right-handed alpha
Helix 2
2
A
33 44Right-handed alpha
Helix 3
3
A
47 63Right-handed alpha
Helix 4
4
A
106 118Right-handed alpha
Helix 5
5
A
120 147Right-handed alpha
Helix 6
6
A
158 163Right-handed 310
Helix 7
7
A
167 169Right-handed 310
Helix 8
8
A
170 176Right-handed alpha
Helix 9
9
A
203 217Right-handed alpha
Helix 10
10
A
220 228Right-handed alpha
Helix 11
11
A
234 255Right-handed alpha
Helix 12
12
A
259 276Right-handed alpha
Helix 13
13
A
299 303Right-handed 310
Helix 14
14
A
304 309Right-handed alpha
Helix 15
15
A
312 327Right-handed alpha
Helix 16
16
A
355 369Right-handed alpha
Helix 17
17
A
371 390Right-handed alpha
Helix 18
18
A
408 419Right-handed alpha
Helix 19
19
B
3 16Right-handed alpha
Helix 20
20
B
33 44Right-handed alpha
Helix 21
21
B
47 63Right-handed alpha
Helix 22
22
B
106 118Right-handed alpha
Helix 23
23
B
120 147Right-handed alpha
Helix 24
24
B
158 163Right-handed 310
Helix 25
25
B
167 169Right-handed 310
Helix 26
26
B
170 176Right-handed alpha
Helix 27
27
B
203 217Right-handed alpha
Helix 28
28
B
220 228Right-handed alpha
Helix 29
29
B
234 255Right-handed alpha
Helix 30
30
B
259 276Right-handed alpha
Helix 31
31
B
299 303Right-handed 310
Helix 32
32
B
304 309Right-handed alpha
Helix 33
33
B
312 328Right-handed alpha
Helix 34
34
B
355 369Right-handed alpha
Helix 35
35
B
371 390Right-handed alpha
Helix 36
36
B
408 419Right-handed alpha
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There are 8 sheets in PDB entry 2Z07. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
31 32first strand
Strand 2
A
72 74anti-parallel
Strand 3
A
97 98anti-parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
232 233first strand
Strand 2
A
287 288anti-parallel
Strand 3
A
293 294anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
277 278first strand
Strand 2
A
283 284anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
392 395first strand
Strand 2
A
402 406anti-parallel
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There are 3 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
31 32first strand
Strand 2
B
72 74anti-parallel
Strand 3
B
97 98anti-parallel
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There are 3 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
232 233first strand
Strand 2
B
287 288anti-parallel
Strand 3
B
293 294anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
277 278first strand
Strand 2
B
283 284anti-parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
392 395first strand
Strand 2
B
402 406anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il