Analysis of interatomic Contacts of Structural Units in PDB entry:
2Z0F


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2Z0F entry

There are 2 chains in PDB entry 2Z0F (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ALA 524
B
 MET 1ALA 524
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 40 helices in PDB entry 2Z0F. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
1 13Right-handed alpha
Helix 2
2
A
19 23Right-handed 310
Helix 3
3
A
41 56Right-handed alpha
Helix 4
4
A
74 89Right-handed alpha
Helix 5
5
A
103 116Right-handed alpha
Helix 6
6
A
150 167Right-handed alpha
Helix 7
7
A
176 184Right-handed alpha
Helix 8
8
A
188 197Right-handed alpha
Helix 9
9
A
198 200Right-handed 310
Helix 10
10
A
202 209Right-handed alpha
Helix 11
11
A
222 234Right-handed alpha
Helix 12
12
A
302 316Right-handed alpha
Helix 13
13
A
333 342Right-handed alpha
Helix 14
14
A
352 355Right-handed 310
Helix 15
15
A
356 363Right-handed alpha
Helix 16
16
A
390 406Right-handed alpha
Helix 17
17
A
408 421Right-handed alpha
Helix 18
18
A
433 441Right-handed alpha
Helix 19
19
A
504 523Right-handed alpha
Helix 20
20
B
2 13Right-handed alpha
Helix 21
21
B
19 23Right-handed 310
Helix 22
22
B
41 56Right-handed alpha
Helix 23
23
B
74 89Right-handed alpha
Helix 24
24
B
103 116Right-handed alpha
Helix 25
25
B
150 167Right-handed alpha
Helix 26
26
B
176 184Right-handed alpha
Helix 27
27
B
188 197Right-handed alpha
Helix 28
28
B
198 200Right-handed 310
Helix 29
29
B
202 208Right-handed alpha
Helix 30
30
B
222 234Right-handed alpha
Helix 31
31
B
272 277Right-handed 310
Helix 32
32
B
302 318Right-handed alpha
Helix 33
33
B
332 342Right-handed alpha
Helix 34
34
B
352 355Right-handed 310
Helix 35
35
B
356 362Right-handed alpha
Helix 36
36
B
390 406Right-handed alpha
Helix 37
37
B
408 421Right-handed alpha
Helix 38
38
B
433 443Right-handed alpha
Helix 39
39
B
444 448Right-handed 310
Helix 40
40
B
504 523Right-handed alpha
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There are 10 sheets in PDB entry 2Z0F. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
26 27first strand
Strand 2
A
30 33anti-parallel
Strand 3
A
137 142anti-parallel
Strand 4
A
123 127anti-parallel
Strand 5
A
65 69parallel
Strand 6
A
93 96parallel
Strand 7
A
185 187parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
237 239first strand
Strand 2
A
213 216parallel
Strand 3
A
281 285parallel
Strand 4
A
292 296anti-parallel
Strand 5
A
299 300anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
346 349first strand
Strand 2
A
324 328parallel
Strand 3
A
365 370parallel
Strand 4
A
374 377anti-parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
424 431first strand
Strand 2
A
494 501anti-parallel
Strand 3
A
482 488anti-parallel
Strand 4
A
471 478anti-parallel
Strand 5
A
460 464anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
452 453first strand
Strand 2
A
456 457anti-parallel
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There are 6 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
31 33first strand
Strand 2
B
137 142anti-parallel
Strand 3
B
123 127anti-parallel
Strand 4
B
65 69parallel
Strand 5
B
93 96parallel
Strand 6
B
185 187parallel
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There are 5 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
237 239first strand
Strand 2
B
213 216parallel
Strand 3
B
281 285parallel
Strand 4
B
292 296anti-parallel
Strand 5
B
299 300anti-parallel
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There are 4 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
346 349first strand
Strand 2
B
324 328parallel
Strand 3
B
365 370parallel
Strand 4
B
374 377anti-parallel
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There are 5 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
424 431first strand
Strand 2
B
494 501anti-parallel
Strand 3
B
482 488anti-parallel
Strand 4
B
471 478anti-parallel
Strand 5
B
460 464anti-parallel
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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
452 453first strand
Strand 2
B
456 457anti-parallel
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