Analysis of interatomic Contacts of Structural Units in PDB entry:
2Z0Q


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2Z0Q entry

There is 1 chain in PDB entry 2Z0Q (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 4GLU 339
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 2Z0Q. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
7 38Right-handed alpha
Helix 2
2
A
38 45Right-handed alpha
Helix 3
3
A
49 58Right-handed alpha
Helix 4
4
A
59 78Right-handed alpha
Helix 5
5
A
87 95Right-handed alpha
Helix 6
6
A
96 98Right-handed 310
Helix 7
7
A
99 119Right-handed alpha
Helix 8
8
A
121 126Right-handed alpha
Helix 9
9
A
144 146Right-handed 310
Helix 10
10
A
147 166Right-handed alpha
Helix 11
11
A
172 206Right-handed alpha
Helix 12
12
A
216 221Right-handed alpha
Helix 13
13
A
272 274Right-handed 310
Helix 14
14
A
295 300Right-handed alpha
Helix 15
15
A
310 314Right-handed 310
Helix 16
16
A
323 339Right-handed alpha
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There are 2 sheets in PDB entry 2Z0Q. Click on sheet of interest to get list of strands forming it: A, B,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
207 208first strand
Strand 2
A
259 264parallel
Strand 3
A
247 256anti-parallel
Strand 4
A
269 270anti-parallel
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There are 8 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
207 208first strand
Strand 2
A
259 264parallel
Strand 3
A
247 256anti-parallel
Strand 4
A
238 244anti-parallel
Strand 5
A
225 233anti-parallel
Strand 6
A
315 320anti-parallel
Strand 7
A
303 308anti-parallel
Strand 8
A
275 278anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il