Analysis of interatomic Contacts of Structural Units in PDB entry:
2Z2R


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2Z2R entry

There are 2 chains in PDB entry 2Z2R (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 82LEU 365
B
 GLY 83LEU 365
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 2Z2R. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
82 87Right-handed alpha
Helix 2
2
A
89 141Right-handed alpha
Helix 3
3
A
146 161Right-handed alpha
Helix 4
4
A
187 196Right-handed alpha
Helix 5
5
A
196 201Right-handed alpha
Helix 6
6
A
204 212Right-handed alpha
Helix 7
7
A
311 317Right-handed 310
Helix 8
8
A
332 351Right-handed alpha
Helix 9
9
A
352 354Right-handed 310
Helix 10
10
A
355 362Right-handed alpha
Helix 11
11
B
89 141Right-handed alpha
Helix 12
12
B
146 160Right-handed alpha
Helix 13
13
B
162 166Right-handed 310
Helix 14
14
B
187 196Right-handed alpha
Helix 15
15
B
196 201Right-handed alpha
Helix 16
16
B
204 212Right-handed alpha
Helix 17
17
B
278 282Right-handed 310
Helix 18
18
B
311 317Right-handed 310
Helix 19
19
B
329 334Right-handed alpha
Helix 20
20
B
335 351Right-handed alpha
Helix 21
21
B
355 362Right-handed alpha
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There are 5 sheets in PDB entry 2Z2R. Click on sheet of interest to get list of strands forming it: A, B, C, D, E,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
214 217first strand
Strand 2
A
228 235anti-parallel
Strand 3
A
220 221anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
214 217first strand
Strand 2
A
228 235anti-parallel
Strand 3
A
247 254anti-parallel
Strand 4
A
266 271anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
285 293first strand
Strand 2
A
300 308anti-parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
214 222first strand
Strand 2
B
228 235anti-parallel
Strand 3
B
247 254anti-parallel
Strand 4
B
266 271anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
285 293first strand
Strand 2
B
300 308anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il