Analysis of interatomic
Contacts of Structural
Units in PDB entry:
Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A.,
Prilusky J., Abola E.E. and Edelman M. (1999) Automated
analysis of interatomic contacts in proteins.
Bioinformatics, 15, 327-332).
This page provides analyses of
contacts formed by:
For analysis of ligand-protein contacts, use:
3D structure can be seen in additional window with
STING software for 2Z2T entry
There are 9 chains in PDB entry 2Z2T
(CSU analysis of residue contacts immediately below table)
| Chain ID |
Initial residue | Terminal residue |
A
|
SER 1546 | LEU 1581 |
B
|
SER 2546 | LEU 2581 |
C
|
SER 3546 | LEU 3581 |
D
|
TRP 1628 | TRP 1628 |
D
|
GLU 1630 | LYS 1661 |
E
|
TRP 2628 | TRP 2628 |
E
|
GLU 2630 | LYS 2661 |
F
|
TRP 3628 | TRP 3628 |
F
|
GLU 3630 | LYS 3661 |
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There are 6
helices in PDB entry 2Z2T. Click on helix of interest for
CSU analysis.
Helix number
| Helix ID | Chain ID |
Initial residue | Terminal residue |
Helix class |
| Helix 1 |
1 | A
| 1546 |
1581 | Right-handed alpha |
| Helix 2 |
2 | B
| 2546 |
2581 | Right-handed alpha |
| Helix 3 |
3 | C
| 3546 |
3581 | Right-handed alpha |
| Helix 4 |
4 | D
| 1628 |
1661 | Right-handed alpha |
| Helix 5 |
5 | E
| 2628 |
2661 | Right-handed alpha |
| Helix 6 |
6 | F
| 3628 |
3661 | Right-handed alpha |
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There are no sheets in PDB entry
2Z2T
Please mail
questions/suggestions concerning this page
to
Vladimir.Sobolev@weizmann.
ac.il