Analysis of interatomic Contacts of Structural Units in PDB entry:
2Z34


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2Z34 entry

There are 4 chains in PDB entry 2Z34 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 2ASP 160
B
 SER 2ASP 160
C
 VAL 474THR 494
D
 GLN 475SER 496
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 6 helices in PDB entry 2Z34. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
80 84Right-handed 310
Helix 2
2
A
86 91Right-handed 310
Helix 3
3
A
137 139Right-handed 310
Helix 4
4
B
80 84Right-handed 310
Helix 5
5
B
86 91Right-handed 310
Helix 6
6
B
137 139Right-handed 310
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There are 6 sheets in PDB entry 2Z34. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
4 11first strand
Strand 2
A
22 30anti-parallel
Strand 3
A
68 76anti-parallel
Strand 4
C
490 493anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
16 17first strand
Strand 2
A
141 145anti-parallel
Strand 3
A
105 118anti-parallel
Strand 4
A
151 154anti-parallel
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There are 8 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
16 17first strand
Strand 2
A
141 145anti-parallel
Strand 3
A
105 118anti-parallel
Strand 4
A
92 102anti-parallel
Strand 5
A
38 45anti-parallel
Strand 6
A
55 62anti-parallel
Strand 7
C
485 487parallel
Strand 8
C
477 479anti-parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
4 11first strand
Strand 2
B
22 30anti-parallel
Strand 3
B
68 76anti-parallel
Strand 4
D
490 493anti-parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
16 17first strand
Strand 2
B
141 145anti-parallel
Strand 3
B
105 118anti-parallel
Strand 4
B
151 154anti-parallel
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There are 8 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
16 17first strand
Strand 2
B
141 145anti-parallel
Strand 3
B
105 118anti-parallel
Strand 4
B
92 102anti-parallel
Strand 5
B
38 45anti-parallel
Strand 6
B
55 62anti-parallel
Strand 7
D
485 487parallel
Strand 8
D
477 479anti-parallel
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