Analysis of interatomic Contacts of Structural Units in PDB entry:
2Z43


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2Z43 entry

There are 3 chains in PDB entry 2Z43 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 72GLU 323
B
 LYS 12GLU 324
C
 LYS 12GLU 323
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 42 helices in PDB entry 2Z43. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
75 84Right-handed alpha
Helix 2
2
A
93 100Right-handed alpha
Helix 3
3
A
119 131Right-handed alpha
Helix 4
4
A
132 133Right-handed 310
Helix 5
5
A
134 138Right-handed 310
Helix 6
6
A
154 165Right-handed alpha
Helix 7
7
A
168 175Right-handed alpha
Helix 8
8
A
183 201Right-handed alpha
Helix 9
9
A
213 220Right-handed alpha
Helix 10
10
A
225 248Right-handed alpha
Helix 11
11
B
13 17Right-handed 310
Helix 12
12
B
21 30Right-handed alpha
Helix 13
13
B
35 41Right-handed alpha
Helix 14
14
B
43 52Right-handed alpha
Helix 15
15
B
54 69Right-handed alpha
Helix 16
16
B
75 84Right-handed alpha
Helix 17
17
B
93 100Right-handed alpha
Helix 18
18
B
119 131Right-handed alpha
Helix 19
19
B
132 133Right-handed 310
Helix 20
20
B
134 138Right-handed 310
Helix 21
21
B
154 165Right-handed alpha
Helix 22
22
B
168 175Right-handed alpha
Helix 23
23
B
183 201Right-handed alpha
Helix 24
24
B
213 220Right-handed alpha
Helix 25
25
B
222 224Right-handed 310
Helix 26
26
B
225 248Right-handed alpha
Helix 27
27
C
13 17Right-handed 310
Helix 28
28
C
21 30Right-handed alpha
Helix 29
29
C
35 41Right-handed alpha
Helix 30
30
C
43 50Right-handed alpha
Helix 31
31
C
54 69Right-handed alpha
Helix 32
32
C
75 84Right-handed alpha
Helix 33
33
C
93 100Right-handed alpha
Helix 34
34
C
119 131Right-handed alpha
Helix 35
35
C
132 133Right-handed 310
Helix 36
36
C
134 138Right-handed 310
Helix 37
37
C
154 165Right-handed alpha
Helix 38
38
C
168 175Right-handed alpha
Helix 39
39
C
183 201Right-handed alpha
Helix 40
40
C
213 220Right-handed alpha
Helix 41
41
C
222 224Right-handed 310
Helix 42
42
C
225 248Right-handed alpha
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There are 6 sheets in PDB entry 2Z43. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
88 89first strand
Strand 2
A
104 105anti-parallel
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There are 9 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
176 180first strand
Strand 2
A
143 148parallel
Strand 3
A
204 209parallel
Strand 4
A
250 256parallel
Strand 5
A
109 114parallel
Strand 6
A
283 289parallel
Strand 7
A
294 301anti-parallel
Strand 8
A
308 315anti-parallel
Strand 9
A
318 320anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
88 89first strand
Strand 2
B
104 105anti-parallel
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There are 9 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
176 180first strand
Strand 2
B
143 148parallel
Strand 3
B
204 210parallel
Strand 4
B
250 256parallel
Strand 5
B
108 114parallel
Strand 6
B
283 289parallel
Strand 7
B
294 301anti-parallel
Strand 8
B
309 315anti-parallel
Strand 9
B
318 320anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
88 89first strand
Strand 2
C
104 105anti-parallel
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There are 9 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
176 180first strand
Strand 2
C
143 148parallel
Strand 3
C
204 210parallel
Strand 4
C
250 256parallel
Strand 5
C
108 114parallel
Strand 6
C
283 289parallel
Strand 7
C
294 301anti-parallel
Strand 8
C
309 315anti-parallel
Strand 9
C
318 321anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il