Analysis of interatomic Contacts of Structural Units in PDB entry:
2Z5C


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2Z5C entry

There are 6 chains in PDB entry 2Z5C (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 4GLY 147
B
 ILE 2ALA 178
C
 LEU 33GLU 250
D
 LYS 4GLY 147
E
 ILE 2ALA 178
F
 LEU 33GLU 250
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 2Z5C. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
90 109Right-handed alpha
Helix 2
2
A
124 129Right-handed alpha
Helix 3
3
A
130 146Right-handed alpha
Helix 4
4
B
108 122Right-handed alpha
Helix 5
5
B
147 150Right-handed 310
Helix 6
6
B
163 175Right-handed alpha
Helix 7
7
C
85 104Right-handed alpha
Helix 8
8
C
108 122Right-handed alpha
Helix 9
9
C
175 185Right-handed alpha
Helix 10
10
C
192 208Right-handed alpha
Helix 11
11
C
232 247Right-handed alpha
Helix 12
12
D
90 109Right-handed alpha
Helix 13
13
D
124 129Right-handed alpha
Helix 14
14
D
130 146Right-handed alpha
Helix 15
15
E
107 122Right-handed alpha
Helix 16
16
E
147 150Right-handed 310
Helix 17
17
E
163 175Right-handed alpha
Helix 18
18
F
85 104Right-handed alpha
Helix 19
19
F
108 122Right-handed alpha
Helix 20
20
F
175 185Right-handed alpha
Helix 21
21
F
192 208Right-handed alpha
Helix 22
22
F
232 247Right-handed alpha
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There are 8 sheets in PDB entry 2Z5C. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
5 10first strand
Strand 2
A
21 26anti-parallel
Strand 3
A
38 44anti-parallel
Strand 4
A
112 118parallel
Strand 5
A
55 64anti-parallel
Strand 6
A
80 86anti-parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
3 8first strand
Strand 2
B
27 32anti-parallel
Strand 3
B
40 44anti-parallel
Strand 4
B
140 145parallel
Strand 5
B
50 55anti-parallel
Strand 6
B
96 101anti-parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
169 172first strand
Strand 2
C
37 40anti-parallel
Strand 3
C
46 51anti-parallel
Strand 4
C
217 223anti-parallel
Strand 5
C
227 230anti-parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
67 71first strand
Strand 2
C
74 78anti-parallel
Strand 3
C
142 148anti-parallel
Strand 4
C
152 158anti-parallel
Strand 5
C
164 167anti-parallel
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There are 6 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
5 10first strand
Strand 2
D
21 26anti-parallel
Strand 3
D
38 44anti-parallel
Strand 4
D
112 118parallel
Strand 5
D
55 64anti-parallel
Strand 6
D
80 86anti-parallel
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There are 6 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
3 8first strand
Strand 2
E
27 32anti-parallel
Strand 3
E
40 44anti-parallel
Strand 4
E
140 145parallel
Strand 5
E
50 55anti-parallel
Strand 6
E
96 101anti-parallel
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There are 5 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
169 172first strand
Strand 2
F
37 40anti-parallel
Strand 3
F
46 51anti-parallel
Strand 4
F
217 223anti-parallel
Strand 5
F
227 230anti-parallel
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There are 5 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
67 71first strand
Strand 2
F
74 78anti-parallel
Strand 3
F
142 148anti-parallel
Strand 4
F
152 158anti-parallel
Strand 5
F
164 167anti-parallel
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