Analysis of interatomic Contacts of Structural Units in PDB entry:
2Z71


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2Z71 entry

There are 2 chains in PDB entry 2Z71 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 1GLN 330
C
 GLY 1VAL 331
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 2Z71. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
101 103Right-handed 310
Helix 2
2
A
104 113Right-handed alpha
Helix 3
3
A
116 123Right-handed alpha
Helix 4
4
A
178 186Right-handed alpha
Helix 5
5
A
187 190Right-handed 310
Helix 6
6
A
213 217Right-handed 310
Helix 7
7
A
224 239Right-handed alpha
Helix 8
8
A
244 258Right-handed alpha
Helix 9
9
C
101 103Right-handed 310
Helix 10
10
C
104 113Right-handed alpha
Helix 11
11
C
115 123Right-handed alpha
Helix 12
12
C
178 186Right-handed alpha
Helix 13
13
C
187 190Right-handed 310
Helix 14
14
C
224 239Right-handed alpha
Helix 15
15
C
244 258Right-handed alpha
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There are 10 sheets in PDB entry 2Z71. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
172 173first strand
Strand 2
A
2 7anti-parallel
Strand 3
A
13 21anti-parallel
Strand 4
A
275 283anti-parallel
Strand 5
A
288 293anti-parallel
Strand 6
A
296 303anti-parallel
Strand 7
C
326 327parallel
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There are 8 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
163 166first strand
Strand 2
A
153 158anti-parallel
Strand 3
A
142 147anti-parallel
Strand 4
A
77 82anti-parallel
Strand 5
A
66 72anti-parallel
Strand 6
A
54 59anti-parallel
Strand 7
A
28 32anti-parallel
Strand 8
A
315 317anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
37 39first strand
Strand 2
A
47 49anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
98 100first strand
Strand 2
A
126 128parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
200 202first strand
Strand 2
A
205 207anti-parallel
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There are 7 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
326 327first strand
Strand 2
C
300 303parallel
Strand 3
C
288 293anti-parallel
Strand 4
C
275 283anti-parallel
Strand 5
C
13 21anti-parallel
Strand 6
C
2 7anti-parallel
Strand 7
C
172 173anti-parallel
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There are 8 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
163 166first strand
Strand 2
C
153 158anti-parallel
Strand 3
C
142 147anti-parallel
Strand 4
C
77 82anti-parallel
Strand 5
C
66 72anti-parallel
Strand 6
C
54 59anti-parallel
Strand 7
C
28 32anti-parallel
Strand 8
C
315 317anti-parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
38 39first strand
Strand 2
C
47 48anti-parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
98 100first strand
Strand 2
C
126 128parallel
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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
200 202first strand
Strand 2
C
205 207anti-parallel
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