Analysis of interatomic Contacts of Structural Units in PDB entry:
2Z80


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2Z80 entry

There are 2 chains in PDB entry 2Z80 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 27PRO 353
B
 SER 27PRO 353
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 10 helices in PDB entry 2Z80. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
116 121Right-handed alpha
Helix 2
2
A
212 221Right-handed alpha
Helix 3
3
A
262 275Right-handed alpha
Helix 4
4
A
316 330Right-handed alpha
Helix 5
5
A
346 350Right-handed 310
Helix 6
6
B
116 121Right-handed alpha
Helix 7
7
B
212 221Right-handed alpha
Helix 8
8
B
262 275Right-handed alpha
Helix 9
9
B
316 330Right-handed alpha
Helix 10
10
B
346 350Right-handed 310
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There are 6 sheets in PDB entry 2Z80. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 14 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
29 30first strand
Strand 2
A
35 37anti-parallel
Strand 3
A
56 58parallel
Strand 4
A
80 82parallel
Strand 5
A
104 106parallel
Strand 6
A
128 130parallel
Strand 7
A
153 158parallel
Strand 8
A
175 183parallel
Strand 9
A
199 206parallel
Strand 10
A
224 230parallel
Strand 11
A
253 257parallel
Strand 12
A
281 283parallel
Strand 13
A
305 307parallel
Strand 14
A
334 335parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
66 67first strand
Strand 2
A
90 91parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
164 165first strand
Strand 2
A
188 189parallel
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There are 14 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
29 30first strand
Strand 2
B
35 37anti-parallel
Strand 3
B
56 58parallel
Strand 4
B
80 82parallel
Strand 5
B
104 106parallel
Strand 6
B
128 130parallel
Strand 7
B
153 157parallel
Strand 8
B
175 182parallel
Strand 9
B
199 206parallel
Strand 10
B
224 230parallel
Strand 11
B
253 257parallel
Strand 12
B
281 283parallel
Strand 13
B
305 307parallel
Strand 14
B
334 335parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
66 67first strand
Strand 2
B
90 91parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
164 165first strand
Strand 2
B
188 189parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il