Analysis of interatomic Contacts of Structural Units in PDB entry:
2Z86

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 2Z86 entry

There are 4 chains in PDB entry 2Z86 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ILE 61	ILE 682
B	LYS 58	ILE 682
C	ALA 59	ILE 682
D	ALA 59	ILE 682

There are 92 helices in PDB entry 2Z86. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	64	74	Right-handed alpha
Helix 2	2	A	80	95	Right-handed alpha
Helix 3	3	A	129	135	Right-handed alpha
Helix 4	4	A	161	174	Right-handed alpha
Helix 5	5	A	193	200	Right-handed alpha
Helix 6	6	A	218	230	Right-handed alpha
Helix 7	7	A	247	259	Right-handed alpha
Helix 8	8	A	277	284	Right-handed alpha
Helix 9	9	A	286	290	Right-handed 310
Helix 10	10	A	312	320	Right-handed alpha
Helix 11	11	A	328	333	Right-handed 310
Helix 12	12	A	342	349	Right-handed alpha
Helix 13	13	A	360	372	Right-handed alpha
Helix 14	14	A	380	382	Right-handed 310
Helix 15	15	A	446	456	Right-handed alpha
Helix 16	16	A	474	484	Right-handed alpha
Helix 17	17	A	498	510	Right-handed alpha
Helix 18	18	A	527	539	Right-handed alpha
Helix 19	19	A	569	574	Right-handed alpha
Helix 20	20	A	587	591	Right-handed alpha
Helix 21	21	A	603	613	Right-handed alpha
Helix 22	22	A	639	655	Right-handed alpha
Helix 23	23	B	64	74	Right-handed alpha
Helix 24	24	B	80	95	Right-handed alpha
Helix 25	25	B	129	135	Right-handed alpha
Helix 26	26	B	161	174	Right-handed alpha
Helix 27	27	B	193	200	Right-handed alpha
Helix 28	28	B	218	230	Right-handed alpha
Helix 29	29	B	247	259	Right-handed alpha
Helix 30	30	B	277	284	Right-handed alpha
Helix 31	31	B	286	290	Right-handed 310
Helix 32	32	B	313	318	Right-handed alpha
Helix 33	33	B	328	333	Right-handed 310
Helix 34	34	B	343	348	Right-handed alpha
Helix 35	35	B	360	372	Right-handed alpha
Helix 36	36	B	380	382	Right-handed 310
Helix 37	37	B	405	411	Right-handed alpha
Helix 38	38	B	446	456	Right-handed alpha
Helix 39	39	B	474	484	Right-handed alpha
Helix 40	40	B	498	510	Right-handed alpha
Helix 41	41	B	527	539	Right-handed alpha
Helix 42	42	B	569	574	Right-handed alpha
Helix 43	43	B	587	592	Right-handed alpha
Helix 44	44	B	603	614	Right-handed alpha
Helix 45	45	B	637	655	Right-handed alpha
Helix 46	46	B	656	659	Right-handed 310
Helix 47	47	C	64	74	Right-handed alpha
Helix 48	48	C	80	95	Right-handed alpha
Helix 49	49	C	129	136	Right-handed alpha
Helix 50	50	C	161	174	Right-handed alpha
Helix 51	51	C	194	202	Right-handed alpha
Helix 52	52	C	218	230	Right-handed alpha
Helix 53	53	C	247	259	Right-handed alpha
Helix 54	54	C	277	284	Right-handed alpha
Helix 55	55	C	311	320	Right-handed alpha
Helix 56	56	C	328	333	Right-handed 310
Helix 57	57	C	342	349	Right-handed alpha
Helix 58	58	C	360	372	Right-handed alpha
Helix 59	59	C	380	382	Right-handed 310
Helix 60	60	C	405	410	Right-handed alpha
Helix 61	61	C	443	456	Right-handed alpha
Helix 62	62	C	474	484	Right-handed alpha
Helix 63	63	C	498	510	Right-handed alpha
Helix 64	64	C	527	539	Right-handed alpha
Helix 65	65	C	569	574	Right-handed alpha
Helix 66	66	C	587	591	Right-handed alpha
Helix 67	67	C	603	613	Right-handed alpha
Helix 68	68	C	631	633	Right-handed 310
Helix 69	69	C	638	655	Right-handed alpha
Helix 70	70	D	64	74	Right-handed alpha
Helix 71	71	D	80	95	Right-handed alpha
Helix 72	72	D	129	136	Right-handed alpha
Helix 73	73	D	161	174	Right-handed alpha
Helix 74	74	D	193	201	Right-handed alpha
Helix 75	75	D	218	230	Right-handed alpha
Helix 76	76	D	247	259	Right-handed alpha
Helix 77	77	D	277	284	Right-handed alpha
Helix 78	78	D	286	290	Right-handed 310
Helix 79	79	D	311	319	Right-handed alpha
Helix 80	80	D	328	333	Right-handed 310
Helix 81	81	D	344	349	Right-handed alpha
Helix 82	82	D	360	372	Right-handed alpha
Helix 83	83	D	380	382	Right-handed 310
Helix 84	84	D	406	413	Right-handed alpha
Helix 85	85	D	446	456	Right-handed alpha
Helix 86	86	D	474	484	Right-handed alpha
Helix 87	87	D	498	510	Right-handed alpha
Helix 88	88	D	527	539	Right-handed alpha
Helix 89	89	D	569	576	Right-handed alpha
Helix 90	90	D	587	592	Right-handed alpha
Helix 91	91	D	603	613	Right-handed alpha
Helix 92	92	D	641	656	Right-handed alpha

There are 19 sheets in PDB entry 2Z86. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	100	101	first strand
Strand 2	A	618	629	anti-parallel
Strand 3	A	544	552	parallel
Strand 4	A	523	524	first strand

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There are 8 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	489	494	first strand
Strand 2	A	462	469	parallel
Strand 3	A	434	440	parallel
Strand 4	A	514	517	parallel
Strand 5	A	583	586	anti-parallel
Strand 6	A	544	552	anti-parallel
Strand 7	A	618	629	parallel
Strand 8	A	558	561	first strand

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There are 14 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	375	378	first strand
Strand 2	A	262	265	parallel
Strand 3	A	337	341	anti-parallel
Strand 4	A	234	238	anti-parallel
Strand 5	A	152	158	parallel
Strand 6	A	181	188	parallel
Strand 7	A	207	212	parallel
Strand 8	B	207	212	anti-parallel
Strand 9	B	181	188	parallel
Strand 10	B	152	158	parallel
Strand 11	B	234	238	parallel
Strand 12	B	337	341	anti-parallel
Strand 13	B	262	265	anti-parallel
Strand 14	B	375	378	parallel

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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	242	244	first strand
Strand 2	A	384	387	anti-parallel
Strand 3	A	268	271	parallel

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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	663	667	first strand
Strand 2	A	677	681	anti-parallel

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There are 3 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	242	244	first strand
Strand 2	B	384	387	anti-parallel
Strand 3	B	268	271	parallel

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There are 8 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	489	493	first strand
Strand 2	B	462	468	parallel
Strand 3	B	434	440	parallel
Strand 4	B	514	517	parallel
Strand 5	B	583	586	anti-parallel
Strand 6	B	544	552	anti-parallel
Strand 7	B	618	629	parallel
Strand 8	B	523	524	anti-parallel

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There are 7 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	489	493	first strand
Strand 2	B	462	468	parallel
Strand 3	B	434	440	parallel
Strand 4	B	514	517	parallel
Strand 5	B	583	586	anti-parallel
Strand 6	B	544	552	anti-parallel
Strand 7	B	558	560	anti-parallel

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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	664	667	first strand
Strand 2	B	677	680	anti-parallel

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There are 4 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	100	101	first strand
Strand 2	C	618	629	anti-parallel
Strand 3	C	544	552	parallel
Strand 4	C	523	524	first strand

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There are 8 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	489	494	first strand
Strand 2	C	462	469	parallel
Strand 3	C	434	440	parallel
Strand 4	C	514	517	parallel
Strand 5	C	583	586	anti-parallel
Strand 6	C	544	552	anti-parallel
Strand 7	C	618	629	parallel
Strand 8	C	558	561	first strand

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There are 14 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	375	378	first strand
Strand 2	C	262	265	parallel
Strand 3	C	337	341	anti-parallel
Strand 4	C	234	238	anti-parallel
Strand 5	C	152	158	parallel
Strand 6	C	181	188	parallel
Strand 7	C	207	212	parallel
Strand 8	D	207	212	anti-parallel
Strand 9	D	181	188	parallel
Strand 10	D	152	158	parallel
Strand 11	D	234	238	parallel
Strand 12	D	337	341	anti-parallel
Strand 13	D	262	265	anti-parallel
Strand 14	D	375	378	parallel

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There are 3 strands in M sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	242	244	first strand
Strand 2	C	384	387	anti-parallel
Strand 3	C	268	271	parallel

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There are 2 strands in N sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	663	667	first strand
Strand 2	C	677	681	anti-parallel

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There are 4 strands in O sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	100	101	first strand
Strand 2	D	618	630	anti-parallel
Strand 3	D	544	553	parallel
Strand 4	D	523	524	first strand

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There are 8 strands in P sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	489	494	first strand
Strand 2	D	462	469	parallel
Strand 3	D	434	440	parallel
Strand 4	D	514	517	parallel
Strand 5	D	583	586	anti-parallel
Strand 6	D	544	553	anti-parallel
Strand 7	D	618	630	parallel
Strand 8	D	558	561	first strand

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There are 3 strands in Q sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	242	244	first strand
Strand 2	D	384	386	anti-parallel
Strand 3	D	268	270	parallel

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There are 2 strands in R sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	295	296	first strand
Strand 2	D	307	308	anti-parallel

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There are 2 strands in S sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	666	667	first strand
Strand 2	D	677	678	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 2Z86

Analysis of interatomic Contacts of Structural Units in PDB entry:
2Z86