Analysis of interatomic Contacts of Structural Units in PDB entry:
2Z8E


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2Z8E entry

There are 2 chains in PDB entry 2Z8E (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 37SER 437
B
 THR 36SER 437
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 40 helices in PDB entry 2Z8E. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
58 70Right-handed alpha
Helix 2
2
A
83 85Right-handed 310
Helix 3
3
A
86 98Right-handed alpha
Helix 4
4
A
110 117Right-handed alpha
Helix 5
5
A
123 131Right-handed alpha
Helix 6
6
A
132 134Right-handed 310
Helix 7
7
A
135 141Right-handed alpha
Helix 8
8
A
164 170Right-handed alpha
Helix 9
9
A
178 192Right-handed alpha
Helix 10
10
A
200 202Right-handed 310
Helix 11
11
A
203 214Right-handed alpha
Helix 12
12
A
232 248Right-handed alpha
Helix 13
13
A
258 267Right-handed alpha
Helix 14
14
A
279 288Right-handed alpha
Helix 15
15
A
326 338Right-handed alpha
Helix 16
16
A
340 347Right-handed alpha
Helix 17
17
A
361 368Right-handed alpha
Helix 18
18
A
372 383Right-handed alpha
Helix 19
19
A
392 407Right-handed alpha
Helix 20
20
A
415 432Right-handed alpha
Helix 21
21
B
58 70Right-handed alpha
Helix 22
22
B
83 85Right-handed 310
Helix 23
23
B
86 97Right-handed alpha
Helix 24
24
B
110 117Right-handed alpha
Helix 25
25
B
123 131Right-handed alpha
Helix 26
26
B
132 134Right-handed 310
Helix 27
27
B
135 141Right-handed alpha
Helix 28
28
B
164 170Right-handed alpha
Helix 29
29
B
178 192Right-handed alpha
Helix 30
30
B
200 202Right-handed 310
Helix 31
31
B
203 214Right-handed alpha
Helix 32
32
B
232 248Right-handed alpha
Helix 33
33
B
258 267Right-handed alpha
Helix 34
34
B
279 288Right-handed alpha
Helix 35
35
B
326 339Right-handed alpha
Helix 36
36
B
340 347Right-handed alpha
Helix 37
37
B
361 368Right-handed alpha
Helix 38
38
B
372 383Right-handed alpha
Helix 39
39
B
392 407Right-handed alpha
Helix 40
40
B
415 432Right-handed alpha
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There are 10 sheets in PDB entry 2Z8E. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
73 79first strand
Strand 2
A
42 48parallel
Strand 3
A
103 107parallel
Strand 4
A
316 320anti-parallel
Strand 5
A
150 152anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
143 144first strand
Strand 2
A
147 148anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
154 155first strand
Strand 2
A
350 351anti-parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
272 276first strand
Strand 2
A
158 163anti-parallel
Strand 3
A
295 298anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
219 222first strand
Strand 2
A
225 228anti-parallel
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There are 5 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
73 79first strand
Strand 2
B
42 48parallel
Strand 3
B
103 107parallel
Strand 4
B
316 320anti-parallel
Strand 5
B
150 152anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
143 144first strand
Strand 2
B
147 148anti-parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
154 155first strand
Strand 2
B
350 351anti-parallel
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There are 3 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
272 276first strand
Strand 2
B
158 163anti-parallel
Strand 3
B
295 299anti-parallel
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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
219 222first strand
Strand 2
B
225 228anti-parallel
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