Analysis of interatomic Contacts of Structural Units in PDB entry:
2Z9O


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2Z9O entry

There are 4 chains in PDB entry 2Z9O (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
C
 T 1 C 33
D
 G 34 A 66
A
 SER 21GLY 251
B
 GLN 20SER 247
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 2Z9O. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
23 30Right-handed alpha
Helix 2
2
A
33 45Right-handed alpha
Helix 3
3
A
64 71Right-handed alpha
Helix 4
4
A
75 89Right-handed alpha
Helix 5
5
A
133 137Right-handed 310
Helix 6
6
A
138 149Right-handed alpha
Helix 7
7
A
151 153Right-handed 310
Helix 8
8
A
160 172Right-handed alpha
Helix 9
9
A
185 192Right-handed alpha
Helix 10
10
A
196 199Right-handed 310
Helix 11
11
A
201 208Right-handed alpha
Helix 12
12
A
208 217Right-handed alpha
Helix 13
14
B
23 30Right-handed alpha
Helix 14
15
B
33 45Right-handed alpha
Helix 15
16
B
64 71Right-handed alpha
Helix 16
17
B
75 90Right-handed alpha
Helix 17
18
B
133 134Right-handed 310
Helix 18
19
B
135 149Right-handed alpha
Helix 19
20
B
151 154Right-handed 310
Helix 20
21
B
160 170Right-handed alpha
Helix 21
23
B
186 191Right-handed alpha
Helix 22
24
B
196 199Right-handed 310
Helix 23
25
B
201 208Right-handed alpha
Helix 24
26
B
208 218Right-handed alpha
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There are 4 sheets in PDB entry 2Z9O. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
59 61first strand
Strand 2
A
126 131anti-parallel
Strand 3
A
115 121anti-parallel
Strand 4
B
108 112anti-parallel
Strand 5
B
94 98anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
94 98first strand
Strand 2
A
108 112anti-parallel
Strand 3
B
116 120anti-parallel
Strand 4
B
126 131anti-parallel
Strand 5
B
59 63anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
177 184first strand
Strand 2
A
235 244anti-parallel
Strand 3
A
222 230anti-parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
179 184first strand
Strand 2
B
235 242anti-parallel
Strand 3
B
225 230anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il