Analysis of interatomic Contacts of Structural Units in PDB entry:
2ZAH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2ZAH entry

There are 3 chains in PDB entry 2ZAH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
SER 95ALA 390
B
SER 95ALA 390
C
ASN 60ALA 390
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 2ZAH. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
117 119Right-handed 310
Helix 2
2
A
138 143Right-handed alpha
Helix 3
3
A
184 189Right-handed alpha
Helix 4
4
A
223 227Right-handed 310
Helix 5
5
A
289 291Right-handed 310
Helix 6
6
A
383 387Right-handed 310
Helix 7
7
B
117 119Right-handed 310
Helix 8
8
B
138 143Right-handed alpha
Helix 9
9
B
184 189Right-handed alpha
Helix 10
10
B
223 227Right-handed 310
Helix 11
11
B
289 291Right-handed 310
Helix 12
12
B
383 387Right-handed 310
Helix 13
13
C
117 119Right-handed 310
Helix 14
14
C
137 143Right-handed alpha
Helix 15
15
C
184 190Right-handed alpha
Helix 16
16
C
223 227Right-handed 310
Helix 17
17
C
289 291Right-handed 310
Helix 18
18
C
383 387Right-handed 310
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There are 18 sheets in PDB entry 2ZAH. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
96 107first strand
Strand 2
A
246 256anti-parallel
Strand 3
A
147 159anti-parallel
Strand 4
A
203 207anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
96 107first strand
Strand 2
A
246 256anti-parallel
Strand 3
A
147 159anti-parallel
Strand 4
A
214 215anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
114 115first strand
Strand 2
A
231 237anti-parallel
Strand 3
A
125 126anti-parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
114 115first strand
Strand 2
A
231 237anti-parallel
Strand 3
A
168 174anti-parallel
Strand 4
A
193 197anti-parallel
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There are 6 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
281 284first strand
Strand 2
A
266 271anti-parallel
Strand 3
A
374 382anti-parallel
Strand 4
A
308 317anti-parallel
Strand 5
A
344 353anti-parallel
Strand 6
A
330 341anti-parallel
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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
293 296first strand
Strand 2
A
299 302anti-parallel
Strand 3
A
364 366anti-parallel
Strand 4
A
324 325anti-parallel
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There are 4 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
96 107first strand
Strand 2
B
246 256anti-parallel
Strand 3
B
147 159anti-parallel
Strand 4
B
203 207anti-parallel
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There are 4 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
96 107first strand
Strand 2
B
246 256anti-parallel
Strand 3
B
147 159anti-parallel
Strand 4
B
214 215anti-parallel
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There are 3 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
114 115first strand
Strand 2
B
231 237anti-parallel
Strand 3
B
125 126anti-parallel
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There are 4 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
114 115first strand
Strand 2
B
231 237anti-parallel
Strand 3
B
168 174anti-parallel
Strand 4
B
193 197anti-parallel
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There are 6 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
281 284first strand
Strand 2
B
266 271anti-parallel
Strand 3
B
374 382anti-parallel
Strand 4
B
308 318anti-parallel
Strand 5
B
343 353anti-parallel
Strand 6
B
330 340anti-parallel
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There are 4 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
293 296first strand
Strand 2
B
299 302anti-parallel
Strand 3
B
364 366anti-parallel
Strand 4
B
324 325anti-parallel
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There are 5 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
88 90first strand
Strand 2
C
96 107anti-parallel
Strand 3
C
246 256anti-parallel
Strand 4
C
147 159anti-parallel
Strand 5
C
203 207anti-parallel
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There are 5 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
88 90first strand
Strand 2
C
96 107anti-parallel
Strand 3
C
246 256anti-parallel
Strand 4
C
147 159anti-parallel
Strand 5
C
214 215anti-parallel
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There are 3 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
114 115first strand
Strand 2
C
231 237anti-parallel
Strand 3
C
125 126anti-parallel
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There are 4 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
114 115first strand
Strand 2
C
231 237anti-parallel
Strand 3
C
168 174anti-parallel
Strand 4
C
193 197anti-parallel
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There are 6 strands in Q sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
281 284first strand
Strand 2
C
266 271anti-parallel
Strand 3
C
374 381anti-parallel
Strand 4
C
308 317anti-parallel
Strand 5
C
344 353anti-parallel
Strand 6
C
330 341anti-parallel
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There are 4 strands in R sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
293 296first strand
Strand 2
C
299 302anti-parallel
Strand 3
C
364 366anti-parallel
Strand 4
C
324 325anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il