Analysis of interatomic Contacts of Structural Units in PDB entry:
2ZBI


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2ZBI entry

There are 2 chains in PDB entry 2ZBI (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 62ALA 326
B
 THR 62LEU 328
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 2ZBI. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
62 100Right-handed alpha
Helix 2
2
A
105 130Right-handed alpha
Helix 3
3
A
184 186Right-handed 310
Helix 4
4
A
213 228Right-handed alpha
Helix 5
5
A
228 233Right-handed alpha
Helix 6
6
A
261 266Right-handed alpha
Helix 7
7
A
289 326Right-handed alpha
Helix 8
8
B
62 100Right-handed alpha
Helix 9
9
B
105 130Right-handed alpha
Helix 10
10
B
184 186Right-handed 310
Helix 11
11
B
213 228Right-handed alpha
Helix 12
12
B
228 233Right-handed alpha
Helix 13
13
B
261 266Right-handed alpha
Helix 14
14
B
289 328Right-handed alpha
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There are 8 sheets in PDB entry 2ZBI. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
131 132first strand
Strand 2
A
135 136anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
144 148first strand
Strand 2
A
156 160anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
234 239first strand
Strand 2
A
244 249anti-parallel
Strand 3
A
173 182anti-parallel
Strand 4
A
275 280anti-parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
203 204first strand
Strand 2
A
199 200anti-parallel
Strand 3
A
253 256anti-parallel
Strand 4
A
270 273anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
131 132first strand
Strand 2
B
135 136anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
145 148first strand
Strand 2
B
156 159anti-parallel
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There are 4 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
235 239first strand
Strand 2
B
244 249anti-parallel
Strand 3
B
173 182anti-parallel
Strand 4
B
275 280anti-parallel
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There are 4 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
203 204first strand
Strand 2
B
199 200anti-parallel
Strand 3
B
253 256anti-parallel
Strand 4
B
270 273anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il