Analysis of interatomic Contacts of Structural Units in PDB entry:
2ZBP


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2ZBP entry

There is 1 chain in PDB entry 2ZBP (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ARG 254
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 10 helices in PDB entry 2ZBP. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
9 14Right-handed alpha
Helix 2
2
A
16 23Right-handed alpha
Helix 3
3
A
55 67Right-handed alpha
Helix 4
4
A
104 118Right-handed alpha
Helix 5
5
A
132 141Right-handed alpha
Helix 6
6
A
153 165Right-handed alpha
Helix 7
7
A
175 180Right-handed alpha
Helix 8
8
A
181 183Right-handed 310
Helix 9
9
A
193 207Right-handed alpha
Helix 10
10
A
223 234Right-handed alpha
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There are 3 sheets in PDB entry 2ZBP. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
27 30first strand
Strand 2
A
34 39anti-parallel
Strand 3
A
2 7anti-parallel
Strand 4
A
50 53anti-parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
70 72first strand
Strand 2
A
75 78anti-parallel
Strand 3
A
89 92parallel
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There are 7 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
170 173first strand
Strand 2
A
144 149parallel
Strand 3
A
123 127parallel
Strand 4
A
185 191parallel
Strand 5
A
208 220parallel
Strand 6
A
247 253anti-parallel
Strand 7
A
237 244anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il