Analysis of interatomic Contacts of Structural Units in PDB entry:
2ZCV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2ZCV entry

There is 1 chain in PDB entry 2ZCV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
MET 1ASN 283
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 15 helices in PDB entry 2ZCV. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
9 20Right-handed alpha
Helix 2
2
A
24 26Right-handed 310
Helix 3
3
A
34 37Right-handed 310
Helix 4
4
A
38 43Right-handed alpha
Helix 5
5
A
55 63Right-handed alpha
Helix 6
6
A
79 95Right-handed alpha
Helix 7
7
A
114 129Right-handed alpha
Helix 8
8
A
143 146Right-handed 310
Helix 9
9
A
147 154Right-handed alpha
Helix 10
10
A
170 184Right-handed alpha
Helix 11
11
A
201 214Right-handed alpha
Helix 12
12
A
223 234Right-handed alpha
Helix 13
13
A
237 253Right-handed alpha
Helix 14
14
A
261 268Right-handed alpha
Helix 15
15
A
273 281Right-handed alpha
Back to top of page

There are 2 sheets in PDB entry 2ZCV. Click on sheet of interest to get list of strands forming it: A, B,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
47 50first strand
Strand 2
A
28 32parallel
Strand 3
A
2 5parallel
Strand 4
A
68 71parallel
Strand 5
A
98 104parallel
Strand 6
A
132 137parallel
Strand 7
A
191 194parallel
Back to list of sheets
Back to top of page

There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
156 159first strand
Strand 2
A
218 221parallel
Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il