Analysis of interatomic Contacts of Structural Units in PDB entry:
2ZD2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2ZD2 entry

There are 2 chains in PDB entry 2ZD2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 1005ARG 1238
B
 SER 2005ARG 2238
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 2ZD2. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
1006 1010Right-handed 310
Helix 2
2
A
1046 1059Right-handed alpha
Helix 3
3
A
1065 1068Right-handed 310
Helix 4
4
A
1069 1081Right-handed alpha
Helix 5
5
A
1085 1095Right-handed alpha
Helix 6
6
A
1096 1099Right-handed 310
Helix 7
7
A
1100 1102Right-handed 310
Helix 8
8
A
1109 1131Right-handed alpha
Helix 9
9
A
1147 1160Right-handed alpha
Helix 10
10
A
1162 1175Right-handed alpha
Helix 11
11
A
1178 1187Right-handed alpha
Helix 12
12
A
1191 1200Right-handed alpha
Helix 13
13
A
1200 1211Right-handed alpha
Helix 14
14
A
1213 1237Right-handed alpha
Helix 15
15
B
2006 2010Right-handed 310
Helix 16
16
B
2046 2059Right-handed alpha
Helix 17
17
B
2065 2068Right-handed 310
Helix 18
18
B
2069 2081Right-handed alpha
Helix 19
19
B
2082 2084Right-handed 310
Helix 20
20
B
2085 2095Right-handed alpha
Helix 21
21
B
2096 2102Right-handed 310
Helix 22
22
B
2109 2131Right-handed alpha
Helix 23
23
B
2147 2160Right-handed alpha
Helix 24
24
B
2162 2175Right-handed alpha
Helix 25
25
B
2178 2187Right-handed alpha
Helix 26
26
B
2191 2200Right-handed alpha
Helix 27
27
B
2200 2211Right-handed alpha
Helix 28
28
B
2213 2237Right-handed alpha
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There are 5 sheets in PDB entry 2ZD2. Click on sheet of interest to get list of strands forming it: A, B, C, D, E,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1016 1019first strand
Strand 2
A
1026 1029anti-parallel
Strand 3
A
1032 1033anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1104 1105first strand
Strand 2
A
1138 1139parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
2016 2020first strand
Strand 2
B
2025 2029anti-parallel
Strand 3
B
2032 2033anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
2035 2036first strand
Strand 2
B
2040 2041anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
2104 2105first strand
Strand 2
B
2138 2139parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il