Analysis of interatomic Contacts of Structural Units in PDB entry:
2ZE9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2ZE9 entry

There is 1 chain in PDB entry 2ZE9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 1PRO 504
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 19 helices in PDB entry 2ZE9. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
6 20Right-handed alpha
Helix 2
2
A
21 24Right-handed 310
Helix 3
3
A
62 78Right-handed alpha
Helix 4
4
A
93 110Right-handed alpha
Helix 5
5
A
131 144Right-handed alpha
Helix 6
6
A
145 150Right-handed 310
Helix 7
7
A
187 192Right-handed alpha
Helix 8
8
A
207 227Right-handed alpha
Helix 9
9
A
228 230Right-handed 310
Helix 10
10
A
247 254Right-handed alpha
Helix 11
11
A
308 315Right-handed alpha
Helix 12
12
A
315 327Right-handed alpha
Helix 13
13
A
350 363Right-handed alpha
Helix 14
14
A
373 377Right-handed 310
Helix 15
15
A
391 407Right-handed alpha
Helix 16
16
A
408 419Right-handed alpha
Helix 17
17
A
474 485Right-handed alpha
Helix 18
18
A
485 494Right-handed alpha
Helix 19
19
A
495 497Right-handed 310
Back to top of page

There are 2 sheets in PDB entry 2ZE9. Click on sheet of interest to get list of strands forming it: A, B,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
47 50first strand
Strand 2
A
200 206anti-parallel
Strand 3
A
178 182anti-parallel
Strand 4
A
171 174anti-parallel
Strand 5
A
82 88anti-parallel
Strand 6
A
115 121parallel
Strand 7
A
151 157parallel
Strand 8
A
234 238anti-parallel
Back to list of sheets
Back to top of page

There are 10 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
47 50first strand
Strand 2
A
200 206anti-parallel
Strand 3
A
28 36anti-parallel
Strand 4
A
264 270anti-parallel
Strand 5
A
468 473anti-parallel
Strand 6
A
452 456anti-parallel
Strand 7
A
444 448anti-parallel
Strand 8
A
331 336anti-parallel
Strand 9
A
366 371parallel
Strand 10
A
420 424parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il