Analysis of interatomic Contacts of Structural Units in PDB entry:
2ZIC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2ZIC entry

There is 1 chain in PDB entry 2ZIC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1LEU 536
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 29 helices in PDB entry 2ZIC. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
4 9Right-handed 310
Helix 2
2
A
15 19Right-handed 310
Helix 3
3
A
29 36Right-handed alpha
Helix 4
4
A
36 44Right-handed alpha
Helix 5
5
A
73 76Right-handed 310
Helix 6
6
A
77 90Right-handed alpha
Helix 7
7
A
108 117Right-handed alpha
Helix 8
8
A
120 126Right-handed 310
Helix 9
9
A
169 185Right-handed alpha
Helix 10
10
A
195 199Right-handed 310
Helix 11
11
A
202 206Right-handed 310
Helix 12
12
A
213 225Right-handed alpha
Helix 13
13
A
226 229Right-handed 310
Helix 14
14
A
241 250Right-handed alpha
Helix 15
15
A
251 254Right-handed 310
Helix 16
16
A
264 269Right-handed 310
Helix 17
17
A
283 298Right-handed alpha
Helix 18
18
A
316 321Right-handed alpha
Helix 19
19
A
327 341Right-handed alpha
Helix 20
20
A
351 355Right-handed 310
Helix 21
21
A
369 381Right-handed alpha
Helix 22
22
A
385 397Right-handed alpha
Helix 23
23
A
398 402Right-handed 310
Helix 24
24
A
410 415Right-handed 310
Helix 25
25
A
426 431Right-handed 310
Helix 26
26
A
433 440Right-handed alpha
Helix 27
27
A
443 458Right-handed alpha
Helix 28
28
A
459 464Right-handed alpha
Helix 29
29
A
515 523Right-handed alpha
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There are 5 sheets in PDB entry 2ZIC. Click on sheet of interest to get list of strands forming it: A, B, C, D, E,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
258 260first strand
Strand 2
A
232 236parallel
Strand 3
A
190 193parallel
Strand 4
A
94 99parallel
Strand 5
A
47 50parallel
Strand 6
A
11 14parallel
Strand 7
A
345 349parallel
Strand 8
A
306 307parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
54 55first strand
Strand 2
A
67 71anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
128 129first strand
Strand 2
A
152 155anti-parallel
Strand 3
A
144 147anti-parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
467 468first strand
Strand 2
A
475 482anti-parallel
Strand 3
A
485 492anti-parallel
Strand 4
A
530 535anti-parallel
Strand 5
A
506 512anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
498 499first strand
Strand 2
A
524 525anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il