Analysis of interatomic Contacts of Structural Units in PDB entry:
2ZII


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2ZII entry

There are 4 chains in PDB entry 2ZII (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 63MET 343
B
 ILE 62ASP 342
C
 ASN 63MET 341
D
 ILE 62LEU 344
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 56 helices in PDB entry 2ZII. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
68 77Right-handed alpha
Helix 2
2
A
82 86Right-handed 310
Helix 3
3
A
89 107Right-handed alpha
Helix 4
4
A
115 121Right-handed 310
Helix 5
5
A
122 125Right-handed 310
Helix 6
6
A
138 150Right-handed alpha
Helix 7
7
A
156 164Right-handed alpha
Helix 8
8
A
169 176Right-handed 310
Helix 9
9
A
179 191Right-handed alpha
Helix 10
10
A
214 229Right-handed alpha
Helix 11
11
A
247 262Right-handed alpha
Helix 12
12
A
265 270Right-handed 310
Helix 13
13
A
273 291Right-handed alpha
Helix 14
14
A
309 320Right-handed alpha
Helix 15
15
A
324 340Right-handed alpha
Helix 16
16
B
68 76Right-handed alpha
Helix 17
17
B
89 107Right-handed alpha
Helix 18
18
B
116 121Right-handed 310
Helix 19
19
B
122 125Right-handed 310
Helix 20
20
B
138 150Right-handed alpha
Helix 21
21
B
156 164Right-handed alpha
Helix 22
22
B
179 191Right-handed alpha
Helix 23
23
B
213 229Right-handed alpha
Helix 24
24
B
247 262Right-handed alpha
Helix 25
25
B
265 270Right-handed alpha
Helix 26
26
B
273 292Right-handed alpha
Helix 27
27
B
309 319Right-handed alpha
Helix 28
28
B
324 339Right-handed alpha
Helix 29
29
C
68 78Right-handed alpha
Helix 30
30
C
89 107Right-handed alpha
Helix 31
31
C
116 121Right-handed 310
Helix 32
32
C
122 125Right-handed 310
Helix 33
33
C
138 150Right-handed alpha
Helix 34
34
C
156 165Right-handed alpha
Helix 35
35
C
179 191Right-handed alpha
Helix 36
36
C
213 229Right-handed alpha
Helix 37
37
C
247 262Right-handed alpha
Helix 38
38
C
265 269Right-handed 310
Helix 39
39
C
273 291Right-handed alpha
Helix 40
40
C
309 320Right-handed alpha
Helix 41
41
C
324 341Right-handed alpha
Helix 42
42
D
68 78Right-handed alpha
Helix 43
43
D
82 86Right-handed 310
Helix 44
44
D
89 107Right-handed alpha
Helix 45
45
D
115 121Right-handed 310
Helix 46
46
D
122 126Right-handed 310
Helix 47
47
D
138 150Right-handed alpha
Helix 48
48
D
155 164Right-handed alpha
Helix 49
49
D
169 176Right-handed 310
Helix 50
50
D
179 191Right-handed alpha
Helix 51
51
D
214 229Right-handed alpha
Helix 52
52
D
247 262Right-handed alpha
Helix 53
53
D
265 269Right-handed 310
Helix 54
54
D
273 292Right-handed alpha
Helix 55
55
D
309 320Right-handed alpha
Helix 56
56
D
324 340Right-handed alpha
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There are 8 sheets in PDB entry 2ZII. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
110 112first strand
Strand 2
A
127 130anti-parallel
Strand 3
A
154 155anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
197 200first strand
Strand 2
A
205 208anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
111 112first strand
Strand 2
B
127 129anti-parallel
Strand 3
B
154 155anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
197 200first strand
Strand 2
B
205 208anti-parallel
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There are 3 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
110 112first strand
Strand 2
C
127 130anti-parallel
Strand 3
C
154 155anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
197 200first strand
Strand 2
C
205 208anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
110 112first strand
Strand 2
D
128 130anti-parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
197 200first strand
Strand 2
D
205 208anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il