Analysis of interatomic Contacts of Structural Units in PDB entry:
2ZJB


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2ZJB entry

There are 2 chains in PDB entry 2ZJB (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 83GLU 340
B
 PRO 83GLU 340
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 2ZJB. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
87 95Right-handed alpha
Helix 2
2
A
96 98Right-handed 310
Helix 3
3
A
105 112Right-handed alpha
Helix 4
4
A
131 143Right-handed alpha
Helix 5
5
A
166 177Right-handed alpha
Helix 6
6
A
180 187Right-handed alpha
Helix 7
7
A
195 213Right-handed alpha
Helix 8
8
A
225 229Right-handed 310
Helix 9
9
A
234 237Right-handed 310
Helix 10
10
A
238 251Right-handed alpha
Helix 11
11
A
253 258Right-handed alpha
Helix 12
12
B
87 96Right-handed alpha
Helix 13
13
B
105 110Right-handed alpha
Helix 14
14
B
131 143Right-handed alpha
Helix 15
15
B
166 174Right-handed alpha
Helix 16
16
B
175 178Right-handed 310
Helix 17
17
B
180 185Right-handed alpha
Helix 18
18
B
197 213Right-handed alpha
Helix 19
19
B
226 233Right-handed alpha
Helix 20
20
B
234 237Right-handed 310
Helix 21
21
B
238 260Right-handed alpha
Helix 22
22
B
291 296Right-handed alpha
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There are 3 sheets in PDB entry 2ZJB. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 9 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
188 192first strand
Strand 2
A
155 160parallel
Strand 3
A
217 223parallel
Strand 4
A
264 268parallel
Strand 5
A
121 125parallel
Strand 6
A
299 305parallel
Strand 7
A
310 317anti-parallel
Strand 8
A
326 331anti-parallel
Strand 9
A
334 337anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
100 101first strand
Strand 2
B
116 117anti-parallel
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There are 9 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
189 192first strand
Strand 2
B
155 160parallel
Strand 3
B
217 223parallel
Strand 4
B
264 268parallel
Strand 5
B
121 125parallel
Strand 6
B
299 305parallel
Strand 7
B
310 315anti-parallel
Strand 8
B
326 331anti-parallel
Strand 9
B
334 337anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il