Analysis of interatomic Contacts of Structural Units in PDB entry:
2ZKL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2ZKL entry

There is 1 chain in PDB entry 2ZKL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1VAL 369
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 9 helices in PDB entry 2ZKL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
10 24Right-handed alpha
Helix 2
2
A
36 47Right-handed alpha
Helix 3
3
A
71 81Right-handed alpha
Helix 4
4
A
96 98Right-handed 310
Helix 5
5
A
101 122Right-handed alpha
Helix 6
6
A
144 154Right-handed alpha
Helix 7
7
A
173 184Right-handed alpha
Helix 8
8
A
205 218Right-handed alpha
Helix 9
9
A
229 242Right-handed alpha
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There are 5 sheets in PDB entry 2ZKL. Click on sheet of interest to get list of strands forming it: A, B, C, D, E,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
27 31first strand
Strand 2
A
2 6parallel
Strand 3
A
49 52parallel
Strand 4
A
88 94parallel
Strand 5
A
125 130parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
132 134first strand
Strand 2
A
167 172parallel
Strand 3
A
201 204anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
190 191first strand
Strand 2
A
194 195anti-parallel
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There are 6 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
254 256first strand
Strand 2
A
260 267anti-parallel
Strand 3
A
273 279anti-parallel
Strand 4
A
347 353anti-parallel
Strand 5
A
295 301anti-parallel
Strand 6
A
328 331anti-parallel
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There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
317 322first strand
Strand 2
A
303 310anti-parallel
Strand 3
A
335 341anti-parallel
Strand 4
A
284 289anti-parallel
Strand 5
A
365 366anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il