Analysis of interatomic Contacts of Structural Units in PDB entry:
2ZMW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2ZMW entry

There are 8 chains in PDB entry 2ZMW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 2VAL 63
A
 HIS 68SER 218
B
 VAL 2VAL 63
B
 HIS 68SER 218
C
 VAL 2VAL 63
C
 HIS 68SER 218
D
 VAL 2VAL 63
D
 HIS 68SER 218
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 2ZMW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
34 36Right-handed 310
Helix 2
2
A
57 62Right-handed alpha
Helix 3
3
A
80 85Right-handed alpha
Helix 4
4
B
34 36Right-handed 310
Helix 5
5
B
57 62Right-handed alpha
Helix 6
6
B
80 85Right-handed alpha
Helix 7
7
C
34 36Right-handed 310
Helix 8
8
C
57 62Right-handed alpha
Helix 9
9
C
80 85Right-handed alpha
Helix 10
10
D
34 36Right-handed 310
Helix 11
11
D
57 62Right-handed alpha
Helix 12
12
D
80 85Right-handed alpha
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There are 4 sheets in PDB entry 2ZMW. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 13 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
139 142first strand
Strand 2
A
155 166anti-parallel
Strand 3
A
171 182anti-parallel
Strand 4
A
90 98anti-parallel
Strand 5
A
103 113anti-parallel
Strand 6
A
116 126anti-parallel
Strand 7
A
9 19parallel
Strand 8
A
22 33anti-parallel
Strand 9
A
38 47anti-parallel
Strand 10
A
207 217anti-parallel
Strand 11
A
193 204anti-parallel
Strand 12
A
145 152anti-parallel
Strand 13
A
155 166anti-parallel
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There are 13 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
139 142first strand
Strand 2
B
155 166anti-parallel
Strand 3
B
171 182anti-parallel
Strand 4
B
90 98anti-parallel
Strand 5
B
103 113anti-parallel
Strand 6
B
116 126anti-parallel
Strand 7
B
9 19parallel
Strand 8
B
22 33anti-parallel
Strand 9
B
38 47anti-parallel
Strand 10
B
207 217anti-parallel
Strand 11
B
193 204anti-parallel
Strand 12
B
145 152anti-parallel
Strand 13
B
155 166anti-parallel
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There are 13 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
139 142first strand
Strand 2
C
155 166anti-parallel
Strand 3
C
171 182anti-parallel
Strand 4
C
90 98anti-parallel
Strand 5
C
103 113anti-parallel
Strand 6
C
116 126anti-parallel
Strand 7
C
9 19parallel
Strand 8
C
22 33anti-parallel
Strand 9
C
38 47anti-parallel
Strand 10
C
207 217anti-parallel
Strand 11
C
193 204anti-parallel
Strand 12
C
145 152anti-parallel
Strand 13
C
155 166anti-parallel
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There are 13 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
139 142first strand
Strand 2
D
155 166anti-parallel
Strand 3
D
171 182anti-parallel
Strand 4
D
90 98anti-parallel
Strand 5
D
103 113anti-parallel
Strand 6
D
116 126anti-parallel
Strand 7
D
9 19parallel
Strand 8
D
22 33anti-parallel
Strand 9
D
38 47anti-parallel
Strand 10
D
207 217anti-parallel
Strand 11
D
193 204anti-parallel
Strand 12
D
145 152anti-parallel
Strand 13
D
155 166anti-parallel
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