Analysis of interatomic Contacts of Structural Units in PDB entry:
2ZNV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2ZNV entry

There are 6 chains in PDB entry 2ZNV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 265ARG 436
B
 MET 1GLY 76
C
 MET 1ASP 77
D
 GLY 265ARG 436
E
 MET 1GLY 76
F
 MET 1VAL 70
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 2ZNV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
274 288Right-handed alpha
Helix 2
2
A
328 338Right-handed alpha
Helix 3
3
A
357 371Right-handed alpha
Helix 4
4
A
381 384Right-handed 310
Helix 5
5
A
392 402Right-handed alpha
Helix 6
6
B
22 35Right-handed alpha
Helix 7
7
B
37 39Right-handed 310
Helix 8
8
B
56 60Right-handed 310
Helix 9
9
C
22 35Right-handed alpha
Helix 10
10
C
37 41Right-handed 310
Helix 11
11
C
55 60Right-handed 310
Helix 12
12
D
274 288Right-handed alpha
Helix 13
13
D
328 339Right-handed alpha
Helix 14
14
D
357 371Right-handed alpha
Helix 15
15
D
381 384Right-handed 310
Helix 16
16
D
392 401Right-handed alpha
Helix 17
17
E
22 35Right-handed alpha
Helix 18
18
E
37 39Right-handed 310
Helix 19
19
F
22 35Right-handed alpha
Helix 20
20
F
37 41Right-handed 310
Helix 21
21
F
56 60Right-handed 310
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There are 10 sheets in PDB entry 2ZNV. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
417 419first strand
Strand 2
A
385 391anti-parallel
Strand 3
A
375 380anti-parallel
Strand 4
A
341 348parallel
Strand 5
A
294 302anti-parallel
Strand 6
A
305 313anti-parallel
Strand 7
A
269 272parallel
Strand 8
A
423 426parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
417 419first strand
Strand 2
A
385 391anti-parallel
Strand 3
A
375 380anti-parallel
Strand 4
A
341 348parallel
Strand 5
A
294 302anti-parallel
Strand 6
A
305 313anti-parallel
Strand 7
A
431 434parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
316 318first strand
Strand 2
A
323 325anti-parallel
Strand 3
B
74 75anti-parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
12 16first strand
Strand 2
B
2 6anti-parallel
Strand 3
B
66 71parallel
Strand 4
B
41 45anti-parallel
Strand 5
B
48 49anti-parallel
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There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
12 16first strand
Strand 2
C
2 6anti-parallel
Strand 3
C
66 69parallel
Strand 4
C
43 45anti-parallel
Strand 5
C
48 49anti-parallel
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There are 8 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
417 419first strand
Strand 2
D
385 391anti-parallel
Strand 3
D
375 380anti-parallel
Strand 4
D
341 348parallel
Strand 5
D
294 302anti-parallel
Strand 6
D
305 313anti-parallel
Strand 7
D
269 272parallel
Strand 8
D
423 426parallel
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There are 7 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
417 419first strand
Strand 2
D
385 391anti-parallel
Strand 3
D
375 380anti-parallel
Strand 4
D
341 348parallel
Strand 5
D
294 302anti-parallel
Strand 6
D
305 313anti-parallel
Strand 7
D
431 434parallel
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There are 3 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
316 318first strand
Strand 2
D
323 325anti-parallel
Strand 3
E
74 75anti-parallel
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There are 5 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
12 16first strand
Strand 2
E
2 6anti-parallel
Strand 3
E
66 71parallel
Strand 4
E
41 45anti-parallel
Strand 5
E
48 49anti-parallel
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There are 5 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
13 16first strand
Strand 2
F
2 6anti-parallel
Strand 3
F
66 70parallel
Strand 4
F
42 45anti-parallel
Strand 5
F
48 49anti-parallel
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