Analysis of interatomic Contacts of Structural Units in PDB entry:
2ZO4


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2ZO4 entry

There is 1 chain in PDB entry 2ZO4 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 3ARG 317
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 2ZO4. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
42 56Right-handed alpha
Helix 2
2
A
59 63Right-handed 310
Helix 3
3
A
72 77Right-handed alpha
Helix 4
4
A
78 85Right-handed alpha
Helix 5
5
A
94 96Right-handed 310
Helix 6
6
A
98 105Right-handed alpha
Helix 7
7
A
109 120Right-handed alpha
Helix 8
8
A
132 139Right-handed alpha
Helix 9
9
A
209 223Right-handed alpha
Helix 10
10
A
239 262Right-handed alpha
Helix 11
11
A
267 276Right-handed alpha
Helix 12
12
A
285 302Right-handed alpha
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There are 3 sheets in PDB entry 2ZO4. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
8 14first strand
Strand 2
A
21 29anti-parallel
Strand 3
A
32 36anti-parallel
Strand 4
A
65 68parallel
Strand 5
A
88 92parallel
Strand 6
A
148 150parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
155 158first strand
Strand 2
A
161 167anti-parallel
Strand 3
A
176 180anti-parallel
Strand 4
A
185 189anti-parallel
Strand 5
A
228 231parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
305 308first strand
Strand 2
A
313 316anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il