Analysis of interatomic Contacts of Structural Units in PDB entry:
2ZOG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2ZOG entry

There are 2 chains in PDB entry 2ZOG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER -3LYS 474
B
 SER -3LYS 474
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 34 helices in PDB entry 2ZOG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
-3 14Right-handed alpha
Helix 2
2
A
14 28Right-handed alpha
Helix 3
3
A
34 36Right-handed 310
Helix 4
4
A
37 55Right-handed alpha
Helix 5
5
A
106 110Right-handed 310
Helix 6
6
A
133 150Right-handed alpha
Helix 7
7
A
165 169Right-handed 310
Helix 8
8
A
172 180Right-handed alpha
Helix 9
9
A
229 233Right-handed alpha
Helix 10
10
A
238 248Right-handed alpha
Helix 11
11
A
270 277Right-handed alpha
Helix 12
12
A
283 291Right-handed alpha
Helix 13
13
A
300 310Right-handed alpha
Helix 14
14
A
349 367Right-handed alpha
Helix 15
15
A
391 406Right-handed alpha
Helix 16
16
A
419 429Right-handed alpha
Helix 17
17
A
453 473Right-handed alpha
Helix 18
18
B
-1 27Right-handed alpha
Helix 19
19
B
34 36Right-handed 310
Helix 20
20
B
37 55Right-handed alpha
Helix 21
21
B
106 110Right-handed 310
Helix 22
22
B
133 150Right-handed alpha
Helix 23
23
B
165 169Right-handed 310
Helix 24
24
B
172 181Right-handed alpha
Helix 25
25
B
229 233Right-handed alpha
Helix 26
26
B
238 248Right-handed alpha
Helix 27
27
B
261 266Right-handed 310
Helix 28
28
B
271 280Right-handed alpha
Helix 29
29
B
283 291Right-handed alpha
Helix 30
30
B
300 310Right-handed alpha
Helix 31
31
B
349 367Right-handed alpha
Helix 32
32
B
391 406Right-handed alpha
Helix 33
33
B
419 429Right-handed alpha
Helix 34
34
B
453 472Right-handed alpha
Back to top of page

There are 12 sheets in PDB entry 2ZOG. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
58 62first strand
Strand 2
A
80 85anti-parallel
Strand 3
A
157 163anti-parallel
Strand 4
A
93 99parallel
Strand 5
A
190 193parallel
Strand 6
A
431 434parallel
Back to list of sheets
Back to top of page

There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
66 68first strand
Strand 2
A
74 76anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
119 121first strand
Strand 2
A
124 126anti-parallel
Strand 3
A
450 452anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
385 386first strand
Strand 2
A
205 210anti-parallel
Strand 3
A
410 414parallel
Back to list of sheets
Back to top of page

There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
313 320first strand
Strand 2
A
335 344anti-parallel
Strand 3
A
212 221anti-parallel
Strand 4
A
373 382anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
227 228first strand
Strand 2
A
331 332anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
58 62first strand
Strand 2
B
80 85anti-parallel
Strand 3
B
157 163anti-parallel
Strand 4
B
93 99parallel
Strand 5
B
190 193parallel
Strand 6
B
431 434parallel
Back to list of sheets
Back to top of page

There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
66 68first strand
Strand 2
B
74 76anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
119 121first strand
Strand 2
B
124 126anti-parallel
Strand 3
B
450 452anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
385 386first strand
Strand 2
B
205 210anti-parallel
Strand 3
B
410 414parallel
Back to list of sheets
Back to top of page

There are 4 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
313 320first strand
Strand 2
B
335 344anti-parallel
Strand 3
B
212 221anti-parallel
Strand 4
B
373 382anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
227 228first strand
Strand 2
B
331 332anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il