Analysis of interatomic Contacts of Structural Units in PDB entry:
2ZP2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2ZP2 entry

There are 2 chains in PDB entry 2ZP2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 100ASP 231
B
 ARG 100ASP 231
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 5 helices in PDB entry 2ZP2. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
115 123Right-handed alpha
Helix 2
2
A
126 135Right-handed alpha
Helix 3
3
A
157 161Right-handed 310
Helix 4
4
B
115 123Right-handed alpha
Helix 5
5
B
126 136Right-handed alpha
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There are 4 sheets in PDB entry 2ZP2. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
101 108first strand
Strand 2
A
196 200anti-parallel
Strand 3
A
176 180anti-parallel
Strand 4
A
183 186anti-parallel
Strand 5
A
152 154anti-parallel
Strand 6
A
139 142anti-parallel
Strand 7
A
221 226anti-parallel
Strand 8
A
101 108parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
101 103first strand
Strand 2
B
221 223parallel
Strand 3
B
139 142anti-parallel
Strand 4
B
152 154anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
169 172first strand
Strand 2
B
191 193anti-parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
183 186first strand
Strand 2
B
176 180anti-parallel
Strand 3
B
196 200anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il