Analysis of interatomic Contacts of Structural Units in PDB entry:
2ZP7

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 2ZP7 entry

There are 6 chains in PDB entry 2ZP7 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 5	ALA 395
B	SER 5	ALA 395
C	SER 5	ALA 395
D	SER 5	ALA 395
E	SER 5	ALA 395
F	SER 5	ALA 395

There are111 helices in PDB entry 2ZP7. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	11	17	Right-handed 310
Helix 2	2	A	20	27	Right-handed alpha
Helix 3	3	A	43	47	Right-handed 310
Helix 4	4	A	48	69	Right-handed alpha
Helix 5	5	A	76	88	Right-handed alpha
Helix 6	6	A	90	92	Right-handed 310
Helix 7	7	A	98	112	Right-handed alpha
Helix 8	8	A	125	134	Right-handed alpha
Helix 9	9	A	150	161	Right-handed alpha
Helix 10	10	A	181	196	Right-handed alpha
Helix 11	11	A	217	226	Right-handed alpha
Helix 12	12	A	252	268	Right-handed alpha
Helix 13	13	A	271	283	Right-handed alpha
Helix 14	14	A	285	312	Right-handed alpha
Helix 15	15	A	336	346	Right-handed alpha
Helix 16	16	A	355	358	Right-handed 310
Helix 17	17	A	375	395	Right-handed alpha
Helix 18	18	B	5	10	Right-handed alpha
Helix 19	19	B	12	17	Right-handed alpha
Helix 20	20	B	20	27	Right-handed alpha
Helix 21	21	B	43	47	Right-handed 310
Helix 22	22	B	48	63	Right-handed alpha
Helix 23	23	B	63	68	Right-handed alpha
Helix 24	24	B	76	88	Right-handed alpha
Helix 25	25	B	90	92	Right-handed 310
Helix 26	26	B	99	112	Right-handed alpha
Helix 27	27	B	125	134	Right-handed alpha
Helix 28	28	B	150	158	Right-handed alpha
Helix 29	29	B	181	196	Right-handed alpha
Helix 30	30	B	217	226	Right-handed alpha
Helix 31	31	B	241	245	Right-handed 310
Helix 32	32	B	252	268	Right-handed alpha
Helix 33	33	B	271	283	Right-handed alpha
Helix 34	34	B	285	312	Right-handed alpha
Helix 35	35	B	336	347	Right-handed alpha
Helix 36	36	B	355	358	Right-handed 310
Helix 37	37	B	375	395	Right-handed alpha
Helix 38	38	C	5	10	Right-handed alpha
Helix 39	39	C	11	17	Right-handed alpha
Helix 40	40	C	22	27	Right-handed alpha
Helix 41	41	C	43	47	Right-handed 310
Helix 42	42	C	48	68	Right-handed alpha
Helix 43	43	C	76	88	Right-handed alpha
Helix 44	44	C	90	92	Right-handed 310
Helix 45	45	C	98	112	Right-handed alpha
Helix 46	46	C	125	134	Right-handed alpha
Helix 47	47	C	150	161	Right-handed alpha
Helix 48	48	C	181	194	Right-handed alpha
Helix 49	49	C	217	226	Right-handed alpha
Helix 50	50	C	252	268	Right-handed alpha
Helix 51	51	C	271	283	Right-handed alpha
Helix 52	52	C	285	312	Right-handed alpha
Helix 53	53	C	336	347	Right-handed alpha
Helix 54	54	C	355	358	Right-handed 310
Helix 55	55	C	375	395	Right-handed alpha
Helix 56	56	D	5	10	Right-handed alpha
Helix 57	57	D	11	16	Right-handed alpha
Helix 58	58	D	22	27	Right-handed alpha
Helix 59	59	D	48	68	Right-handed alpha
Helix 60	60	D	76	88	Right-handed alpha
Helix 61	61	D	90	92	Right-handed 310
Helix 62	62	D	99	112	Right-handed alpha
Helix 63	63	D	125	134	Right-handed alpha
Helix 64	64	D	150	161	Right-handed alpha
Helix 65	65	D	181	196	Right-handed alpha
Helix 66	66	D	217	226	Right-handed alpha
Helix 67	67	D	252	268	Right-handed alpha
Helix 68	68	D	271	283	Right-handed alpha
Helix 69	69	D	285	312	Right-handed alpha
Helix 70	70	D	336	347	Right-handed alpha
Helix 71	71	D	355	358	Right-handed 310
Helix 72	72	D	375	395	Right-handed alpha
Helix 73	73	E	5	10	Right-handed alpha
Helix 74	74	E	11	16	Right-handed alpha
Helix 75	75	E	20	27	Right-handed alpha
Helix 76	76	E	43	47	Right-handed 310
Helix 77	77	E	48	63	Right-handed alpha
Helix 78	78	E	63	69	Right-handed alpha
Helix 79	79	E	76	88	Right-handed alpha
Helix 80	80	E	90	92	Right-handed 310
Helix 81	81	E	98	112	Right-handed alpha
Helix 82	82	E	125	134	Right-handed alpha
Helix 83	83	E	150	161	Right-handed alpha
Helix 84	84	E	181	196	Right-handed alpha
Helix 85	85	E	217	226	Right-handed alpha
Helix 86	86	E	241	245	Right-handed 310
Helix 87	87	E	252	268	Right-handed alpha
Helix 88	88	E	271	283	Right-handed alpha
Helix 89	89	E	285	312	Right-handed alpha
Helix 90	90	E	337	345	Right-handed alpha
Helix 91	91	E	355	358	Right-handed 310
Helix 92	92	E	375	395	Right-handed alpha
Helix 93	93	F	5	10	Right-handed alpha
Helix 94	94	F	11	16	Right-handed alpha
Helix 95	95	F	21	27	Right-handed alpha
Helix 96	96	F	43	47	Right-handed 310
Helix 97	97	F	48	63	Right-handed alpha
Helix 98	98	F	63	68	Right-handed alpha
Helix 99	99	F	76	88	Right-handed alpha
Helix 100	100	F	90	92	Right-handed 310
Helix 101	101	F	98	112	Right-handed alpha
Helix 102	102	F	125	134	Right-handed alpha
Helix 103	103	F	150	161	Right-handed alpha
Helix 104	104	F	181	196	Right-handed alpha
Helix 105	105	F	217	226	Right-handed alpha
Helix 106	106	F	252	268	Right-handed alpha
Helix 107	107	F	271	283	Right-handed alpha
Helix 108	108	F	285	312	Right-handed alpha
Helix 109	109	F	336	347	Right-handed alpha
Helix 110	110	F	355	358	Right-handed 310
Helix 111	111	F	375	395	Right-handed alpha

There are 19 sheets in PDB entry 2ZP7. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	35	36	first strand
Strand 2	A	349	350	parallel

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There are 8 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	94	97	first strand
Strand 2	A	247	250	anti-parallel
Strand 3	A	230	235	anti-parallel
Strand 4	A	199	202	parallel
Strand 5	A	166	168	parallel
Strand 6	A	117	122	parallel
Strand 7	A	138	145	parallel
Strand 8	A	148	149	anti-parallel

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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	317	318	first strand
Strand 2	A	326	330	anti-parallel
Strand 3	A	366	370	anti-parallel
Strand 4	A	352	353	anti-parallel

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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	35	36	first strand
Strand 2	B	349	350	parallel

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There are 8 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	94	97	first strand
Strand 2	B	247	250	anti-parallel
Strand 3	B	230	235	anti-parallel
Strand 4	B	199	202	parallel
Strand 5	B	166	168	parallel
Strand 6	B	117	122	parallel
Strand 7	B	138	145	parallel
Strand 8	B	148	149	anti-parallel

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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	317	318	first strand
Strand 2	B	326	330	anti-parallel
Strand 3	B	366	370	anti-parallel
Strand 4	B	352	353	anti-parallel

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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	35	36	first strand
Strand 2	C	349	350	parallel

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There are 8 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	94	97	first strand
Strand 2	C	247	250	anti-parallel
Strand 3	C	230	235	anti-parallel
Strand 4	C	199	202	parallel
Strand 5	C	166	168	parallel
Strand 6	C	117	122	parallel
Strand 7	C	138	145	parallel
Strand 8	C	148	149	anti-parallel

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There are 4 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	317	318	first strand
Strand 2	C	326	330	anti-parallel
Strand 3	C	366	370	anti-parallel
Strand 4	C	352	353	anti-parallel

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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	35	36	first strand
Strand 2	D	349	350	parallel

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There are 8 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	94	97	first strand
Strand 2	D	247	250	anti-parallel
Strand 3	D	230	235	anti-parallel
Strand 4	D	199	202	parallel
Strand 5	D	166	168	parallel
Strand 6	D	117	122	parallel
Strand 7	D	138	145	parallel
Strand 8	D	148	149	anti-parallel

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There are 4 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	317	318	first strand
Strand 2	D	326	330	anti-parallel
Strand 3	D	366	370	anti-parallel
Strand 4	D	352	353	anti-parallel

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There are 2 strands in M sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	35	36	first strand
Strand 2	E	349	350	parallel

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There are 5 strands in N sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	94	97	first strand
Strand 2	E	247	250	anti-parallel
Strand 3	E	230	235	anti-parallel
Strand 4	E	199	202	parallel
Strand 5	E	166	168	parallel

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There are 3 strands in O sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	117	122	first strand
Strand 2	E	138	145	parallel
Strand 3	E	148	149	anti-parallel

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There are 4 strands in P sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	317	318	first strand
Strand 2	E	326	330	anti-parallel
Strand 3	E	366	370	anti-parallel
Strand 4	E	352	353	anti-parallel

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There are 2 strands in Q sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	35	36	first strand
Strand 2	F	349	350	parallel

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There are 8 strands in R sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	94	97	first strand
Strand 2	F	247	250	anti-parallel
Strand 3	F	230	235	anti-parallel
Strand 4	F	199	202	parallel
Strand 5	F	166	168	parallel
Strand 6	F	117	122	parallel
Strand 7	F	138	145	parallel
Strand 8	F	148	149	anti-parallel

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There are 4 strands in S sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	317	318	first strand
Strand 2	F	326	330	anti-parallel
Strand 3	F	366	370	anti-parallel
Strand 4	F	352	353	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 2ZP7

Analysis of interatomic Contacts of Structural Units in PDB entry:
2ZP7