Analysis of interatomic Contacts of Structural Units in PDB entry:
2ZPA


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2ZPA entry

There are 2 chains in PDB entry 2ZPA (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 2PHE 670
B
 MSE 1PHE 670
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 63 helices in PDB entry 2ZPA. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
2 18Right-handed alpha
Helix 2
2
A
28 43Right-handed alpha
Helix 3
3
A
85 94Right-handed alpha
Helix 4
4
A
108 112Right-handed 310
Helix 5
5
A
117 119Right-handed 310
Helix 6
6
A
120 125Right-handed alpha
Helix 7
7
A
132 144Right-handed alpha
Helix 8
8
A
177 188Right-handed alpha
Helix 9
9
A
204 216Right-handed alpha
Helix 10
10
A
230 238Right-handed alpha
Helix 11
11
A
239 241Right-handed 310
Helix 12
12
A
245 252Right-handed alpha
Helix 13
13
A
264 267Right-handed 310
Helix 14
14
A
268 277Right-handed alpha
Helix 15
15
A
295 305Right-handed alpha
Helix 16
16
A
324 334Right-handed alpha
Helix 17
17
A
338 343Right-handed 310
Helix 18
18
A
357 362Right-handed alpha
Helix 19
19
A
363 377Right-handed alpha
Helix 20
20
A
381 391Right-handed alpha
Helix 21
21
A
418 427Right-handed alpha
Helix 22
22
A
435 445Right-handed alpha
Helix 23
23
A
449 452Right-handed 310
Helix 24
24
A
471 483Right-handed alpha
Helix 25
25
A
497 507Right-handed alpha
Helix 26
26
A
534 560Right-handed alpha
Helix 27
27
A
574 587Right-handed alpha
Helix 28
28
A
594 605Right-handed alpha
Helix 29
29
A
609 618Right-handed alpha
Helix 30
30
A
621 629Right-handed alpha
Helix 31
31
A
633 651Right-handed alpha
Helix 32
32
A
653 667Right-handed alpha
Helix 33
33
B
1 17Right-handed alpha
Helix 34
34
B
28 43Right-handed alpha
Helix 35
35
B
85 94Right-handed alpha
Helix 36
36
B
108 112Right-handed 310
Helix 37
37
B
117 123Right-handed 310
Helix 38
38
B
132 146Right-handed alpha
Helix 39
39
B
177 184Right-handed alpha
Helix 40
40
B
204 212Right-handed alpha
Helix 41
41
B
230 236Right-handed alpha
Helix 42
42
B
245 250Right-handed alpha
Helix 43
43
B
263 267Right-handed 310
Helix 44
44
B
268 279Right-handed alpha
Helix 45
45
B
295 304Right-handed alpha
Helix 46
46
B
324 335Right-handed alpha
Helix 47
47
B
357 362Right-handed alpha
Helix 48
48
B
363 376Right-handed alpha
Helix 49
49
B
381 391Right-handed alpha
Helix 50
50
B
418 427Right-handed alpha
Helix 51
51
B
435 445Right-handed alpha
Helix 52
52
B
449 452Right-handed 310
Helix 53
53
B
465 468Right-handed 310
Helix 54
54
B
471 483Right-handed alpha
Helix 55
55
B
497 506Right-handed alpha
Helix 56
56
B
534 560Right-handed alpha
Helix 57
57
B
574 587Right-handed alpha
Helix 58
58
B
591 593Right-handed 310
Helix 59
59
B
594 605Right-handed alpha
Helix 60
60
B
609 617Right-handed alpha
Helix 61
61
B
621 630Right-handed alpha
Helix 62
62
B
633 653Right-handed alpha
Helix 63
63
B
653 667Right-handed alpha
Back to top of page

There are 6 sheets in PDB entry 2ZPA. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
48 50first strand
Strand 2
A
76 79parallel
Strand 3
A
101 106parallel
Strand 4
A
21 26parallel
Strand 5
A
150 153parallel
Back to list of sheets
Back to top of page

There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
220 223first strand
Strand 2
A
258 262parallel
Strand 3
A
281 287parallel
Strand 4
A
193 199parallel
Strand 5
A
310 313parallel
Back to list of sheets
Back to top of page

There are 7 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
350 355first strand
Strand 2
A
394 400anti-parallel
Strand 3
A
405 415anti-parallel
Strand 4
A
454 463anti-parallel
Strand 5
A
489 495parallel
Strand 6
A
526 532anti-parallel
Strand 7
A
510 514anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
48 50first strand
Strand 2
B
76 79parallel
Strand 3
B
101 106parallel
Strand 4
B
21 26parallel
Strand 5
B
150 153parallel
Back to list of sheets
Back to top of page

There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
259 261first strand
Strand 2
B
282 287parallel
Strand 3
B
194 199parallel
Strand 4
B
309 313parallel
Back to list of sheets
Back to top of page

There are 7 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
350 354first strand
Strand 2
B
394 400anti-parallel
Strand 3
B
405 415anti-parallel
Strand 4
B
454 463anti-parallel
Strand 5
B
489 495parallel
Strand 6
B
526 532anti-parallel
Strand 7
B
510 514anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il