Analysis of interatomic Contacts of Structural Units in PDB entry:
2ZPQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2ZPQ entry

There are 2 chains in PDB entry 2ZPQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 1ALA 220
B
 ILE 1ALA 220
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 6 helices in PDB entry 2ZPQ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
38 42Right-handed 310
Helix 2
2
A
143 151Right-handed alpha
Helix 3
3
A
211 220Right-handed alpha
Helix 4
4
B
38 42Right-handed 310
Helix 5
5
B
143 151Right-handed alpha
Helix 6
6
B
211 220Right-handed alpha
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There are 4 sheets in PDB entry 2ZPQ. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
5 6first strand
Strand 2
A
135 140anti-parallel
Strand 3
A
115 120anti-parallel
Strand 4
A
179 182anti-parallel
Strand 5
A
185 192anti-parallel
Strand 6
A
203 207anti-parallel
Strand 7
A
159 162anti-parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
15 19first strand
Strand 2
A
23 29anti-parallel
Strand 3
A
34 37anti-parallel
Strand 4
A
86 90anti-parallel
Strand 5
A
63 72anti-parallel
Strand 6
A
47 50anti-parallel
Strand 7
A
15 19anti-parallel
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There are 7 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
5 6first strand
Strand 2
B
135 140anti-parallel
Strand 3
B
115 120anti-parallel
Strand 4
B
179 182anti-parallel
Strand 5
B
185 192anti-parallel
Strand 6
B
203 207anti-parallel
Strand 7
B
159 162anti-parallel
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There are 7 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
15 19first strand
Strand 2
B
23 29anti-parallel
Strand 3
B
34 37anti-parallel
Strand 4
B
86 90anti-parallel
Strand 5
B
63 72anti-parallel
Strand 6
B
47 50anti-parallel
Strand 7
B
15 19anti-parallel
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