Analysis of interatomic Contacts of Structural Units in PDB entry:
2ZQ5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2ZQ5 entry

There is 1 chain in PDB entry 2ZQ5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
ARG 7LEU 384
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 25 helices in PDB entry 2ZQ5. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
12 25Right-handed alpha
Helix 2
2
A
35 51Right-handed alpha
Helix 3
3
A
54 82Right-handed alpha
Helix 4
4
A
83 88Right-handed 310
Helix 5
5
A
103 112Right-handed alpha
Helix 6
6
A
121 127Right-handed alpha
Helix 7
7
A
133 139Right-handed 310
Helix 8
8
A
140 157Right-handed alpha
Helix 9
9
A
174 179Right-handed alpha
Helix 10
10
A
180 182Right-handed 310
Helix 11
11
A
186 190Right-handed 310
Helix 12
12
A
193 202Right-handed alpha
Helix 13
13
A
205 220Right-handed alpha
Helix 14
14
A
233 238Right-handed alpha
Helix 15
15
A
238 246Right-handed alpha
Helix 16
16
A
257 260Right-handed 310
Helix 17
17
A
261 273Right-handed alpha
Helix 18
18
A
281 305Right-handed alpha
Helix 19
19
A
306 307Right-handed 310
Helix 20
20
A
308 310Right-handed 310
Helix 21
21
A
317 323Right-handed alpha
Helix 22
22
A
323 335Right-handed alpha
Helix 23
23
A
340 349Right-handed alpha
Helix 24
24
A
366 371Right-handed 310
Helix 25
25
A
373 381Right-handed alpha
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There is 1 sheet ( A) in PDB entry 2ZQ5.

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
117 119first strand
Strand 2
A
227 231parallel
Strand 3
A
94 97parallel
Strand 4
A
250 255parallel
Strand 5
A
312 316parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il