Analysis of interatomic Contacts of Structural Units in PDB entry:
2ZQJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2ZQJ entry

There are 3 chains in PDB entry 2ZQJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 6LYS 416
B
 PRO 6LYS 416
C
 PRO 6LYS 416
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 54 helices in PDB entry 2ZQJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
12 21Right-handed alpha
Helix 2
2
A
22 32Right-handed alpha
Helix 3
3
A
51 59Right-handed alpha
Helix 4
4
A
71 76Right-handed alpha
Helix 5
5
A
83 87Right-handed 310
Helix 6
6
A
88 103Right-handed alpha
Helix 7
7
A
104 127Right-handed alpha
Helix 8
8
A
134 151Right-handed alpha
Helix 9
9
A
155 157Right-handed 310
Helix 10
10
A
158 171Right-handed alpha
Helix 11
11
A
177 203Right-handed alpha
Helix 12
12
A
212 219Right-handed alpha
Helix 13
13
A
229 261Right-handed alpha
Helix 14
14
A
263 271Right-handed alpha
Helix 15
15
A
272 287Right-handed alpha
Helix 16
16
A
318 323Right-handed alpha
Helix 17
17
A
335 340Right-handed 310
Helix 18
18
A
365 383Right-handed alpha
Helix 19
19
B
12 21Right-handed alpha
Helix 20
20
B
23 32Right-handed alpha
Helix 21
21
B
51 59Right-handed alpha
Helix 22
22
B
71 78Right-handed alpha
Helix 23
23
B
83 87Right-handed 310
Helix 24
24
B
88 102Right-handed alpha
Helix 25
25
B
104 129Right-handed alpha
Helix 26
26
B
133 151Right-handed alpha
Helix 27
27
B
158 171Right-handed alpha
Helix 28
28
B
177 202Right-handed alpha
Helix 29
29
B
212 219Right-handed alpha
Helix 30
30
B
229 247Right-handed alpha
Helix 31
31
B
247 261Right-handed alpha
Helix 32
32
B
261 270Right-handed alpha
Helix 33
33
B
272 287Right-handed alpha
Helix 34
34
B
320 324Right-handed 310
Helix 35
35
B
335 340Right-handed 310
Helix 36
36
B
365 382Right-handed alpha
Helix 37
37
C
12 21Right-handed alpha
Helix 38
38
C
22 24Right-handed 310
Helix 39
39
C
51 59Right-handed alpha
Helix 40
40
C
71 76Right-handed alpha
Helix 41
41
C
83 87Right-handed 310
Helix 42
42
C
88 101Right-handed alpha
Helix 43
43
C
104 129Right-handed alpha
Helix 44
44
C
133 151Right-handed alpha
Helix 45
45
C
155 171Right-handed alpha
Helix 46
46
C
177 202Right-handed alpha
Helix 47
47
C
212 219Right-handed alpha
Helix 48
48
C
229 247Right-handed alpha
Helix 49
49
C
247 261Right-handed alpha
Helix 50
50
C
262 271Right-handed alpha
Helix 51
51
C
273 287Right-handed alpha
Helix 52
52
C
318 322Right-handed alpha
Helix 53
53
C
335 340Right-handed 310
Helix 54
54
C
365 382Right-handed alpha
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There are 9 sheets in PDB entry 2ZQJ. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
36 41first strand
Strand 2
A
44 50anti-parallel
Strand 3
A
313 317parallel
Strand 4
A
292 297anti-parallel
Strand 5
A
64 65anti-parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
131 133first strand
Strand 2
A
409 415anti-parallel
Strand 3
A
384 387anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
301 303first strand
Strand 2
A
306 308anti-parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
36 41first strand
Strand 2
B
44 49anti-parallel
Strand 3
B
313 317parallel
Strand 4
B
292 297anti-parallel
Strand 5
B
64 65anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
301 302first strand
Strand 2
B
307 308anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
384 387first strand
Strand 2
B
411 415anti-parallel
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There are 5 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
36 41first strand
Strand 2
C
44 49anti-parallel
Strand 3
C
313 317parallel
Strand 4
C
292 297anti-parallel
Strand 5
C
64 65anti-parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
301 302first strand
Strand 2
C
307 308anti-parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
384 385first strand
Strand 2
C
414 415anti-parallel
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