Analysis of interatomic Contacts of Structural Units in PDB entry:
2ZSK


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2ZSK entry

There are 2 chains in PDB entry 2ZSK (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLU 226
B
 MET 1GLU 226
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 26 helices in PDB entry 2ZSK. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
11 30Right-handed alpha
Helix 2
2
A
45 50Right-handed alpha
Helix 3
3
A
53 73Right-handed alpha
Helix 4
4
A
82 86Right-handed 310
Helix 5
5
A
87 95Right-handed alpha
Helix 6
6
A
101 113Right-handed alpha
Helix 7
7
A
129 138Right-handed alpha
Helix 8
8
A
147 161Right-handed alpha
Helix 9
9
A
162 165Right-handed 310
Helix 10
10
A
169 184Right-handed alpha
Helix 11
11
A
195 199Right-handed 310
Helix 12
12
A
201 205Right-handed 310
Helix 13
13
A
212 226Right-handed alpha
Helix 14
14
B
11 30Right-handed alpha
Helix 15
15
B
44 50Right-handed alpha
Helix 16
16
B
53 73Right-handed alpha
Helix 17
17
B
82 86Right-handed 310
Helix 18
18
B
87 94Right-handed alpha
Helix 19
19
B
101 113Right-handed alpha
Helix 20
20
B
129 139Right-handed alpha
Helix 21
21
B
147 160Right-handed alpha
Helix 22
22
B
161 165Right-handed 310
Helix 23
23
B
169 184Right-handed alpha
Helix 24
24
B
195 199Right-handed 310
Helix 25
25
B
201 205Right-handed 310
Helix 26
26
B
212 226Right-handed alpha
Back to top of page

There are 3 sheets in PDB entry 2ZSK. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
76 79first strand
Strand 2
A
4 8parallel
Strand 3
A
38 42parallel
Strand 4
B
38 42anti-parallel
Strand 5
B
4 8parallel
Strand 6
B
76 79parallel
Back to list of sheets
Back to top of page

There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
142 144first strand
Strand 2
A
117 121parallel
Strand 3
A
188 191parallel
Strand 4
A
208 211parallel
Back to list of sheets
Back to top of page

There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
142 144first strand
Strand 2
B
117 121parallel
Strand 3
B
188 191parallel
Strand 4
B
208 211parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il