Analysis of interatomic Contacts of Structural Units in PDB entry:
2ZUB


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2ZUB entry

There are 2 chains in PDB entry 2ZUB (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 13ALA 322
B
 THR 13ALA 322
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 29 helices in PDB entry 2ZUB. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
21 31Right-handed alpha
Helix 2
2
A
35 41Right-handed alpha
Helix 3
3
A
43 49Right-handed alpha
Helix 4
4
A
54 69Right-handed alpha
Helix 5
5
A
75 86Right-handed alpha
Helix 6
6
A
93 100Right-handed alpha
Helix 7
7
A
121 131Right-handed alpha
Helix 8
8
A
132 133Right-handed 310
Helix 9
9
A
134 138Right-handed 310
Helix 10
10
A
154 165Right-handed alpha
Helix 11
11
A
168 173Right-handed alpha
Helix 12
12
A
183 201Right-handed alpha
Helix 13
13
A
213 220Right-handed alpha
Helix 14
14
A
225 247Right-handed alpha
Helix 15
15
B
21 32Right-handed alpha
Helix 16
16
B
35 41Right-handed alpha
Helix 17
17
B
43 50Right-handed alpha
Helix 18
18
B
54 70Right-handed alpha
Helix 19
19
B
76 86Right-handed alpha
Helix 20
20
B
93 100Right-handed alpha
Helix 21
21
B
119 131Right-handed alpha
Helix 22
22
B
132 133Right-handed 310
Helix 23
23
B
134 138Right-handed 310
Helix 24
24
B
154 165Right-handed alpha
Helix 25
25
B
168 175Right-handed alpha
Helix 26
26
B
183 193Right-handed alpha
Helix 27
27
B
193 201Right-handed alpha
Helix 28
28
B
213 220Right-handed alpha
Helix 29
29
B
222 247Right-handed alpha
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There are 3 sheets in PDB entry 2ZUB. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 10 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
319 321first strand
Strand 2
A
309 314anti-parallel
Strand 3
A
294 301anti-parallel
Strand 4
A
283 289anti-parallel
Strand 5
A
108 114parallel
Strand 6
A
250 256parallel
Strand 7
A
204 209parallel
Strand 8
A
143 148parallel
Strand 9
A
176 180parallel
Strand 10
B
74 75anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
88 89first strand
Strand 2
B
104 105anti-parallel
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There are 9 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
176 180first strand
Strand 2
B
143 148parallel
Strand 3
B
204 210parallel
Strand 4
B
250 256parallel
Strand 5
B
108 114parallel
Strand 6
B
284 289parallel
Strand 7
B
294 301anti-parallel
Strand 8
B
309 314anti-parallel
Strand 9
B
319 320anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il